Materials - TeSS (Training eSupport System)

Filter Clear filters
- Date added
- In the last 24 hours
- In the last 1 week
- In the last 1 month
- Scientific topic
- MicroRNA sequencing125
- RNA sequencing125
- RNA-Seq125
- RNA-Seq analysis125
- Small RNA sequencing125
- Small RNA-Seq125
- Small-Seq125
- Transcriptome profiling125
- WTSS125
- Whole transcriptome shotgun sequencing125
- miRNA-seq125
- Genome annotation110
- Exomes102
- Genomes102
- Genomics102
- Personal genomics102
- Synthetic genomics102
- Viral genomics102
- Whole genomes102
- R92
- R program92
- R script92
- Comparative transcriptomics89
- Transcriptome89
- Transcriptomics89
- Data management74
- Metadata management74
- Research data management (RDM)74
- Chromosome walking69
- Clone verification69
- DNA-Seq69
- DNase-Seq69
- High throughput sequencing69
- High-throughput sequencing69
- NGS69
- NGS data analysis69
- Next gen sequencing69
- Next generation sequencing69
- Panels69
- Primer walking69
- Sanger sequencing69
- Sequencing69
- Targeted next-generation sequencing panels69
- Bayesian methods66
- Biostatistics66
- Descriptive statistics66
- Gaussian processes66
- Inferential statistics66
- Markov processes66
- Multivariate statistics66
- Probabilistic graphical model66
- Probability66
- Statistics66
- Statistics and probability66
- Active learning50
- Ensembl learning50
- Kernel methods50
- Knowledge representation50
- Machine learning50
- Neural networks50
- Recommender system50
- Reinforcement learning50
- Supervised learning50
- Unsupervised learning50
- Python41
- Python program41
- Python script41
- py41
- FAIR data37
- Findable, accessible, interoperable, reusable data37
- Rare diseases36
- Single-cell genomics34
- Single-cell sequencing34
- Bioinformatics33
- Antimicrobial stewardship31
- Data rendering31
- Data visualisation31
- Medical microbiology31
- Metagenomics31
- Microbial genetics31
- Microbial physiology31
- Microbial surveillance31
- Microbiological surveillance31
- Microbiology31
- Molecular infection biology31
- Molecular microbiology31
- Shotgun metagenomics31
- Pipelines30
- Software integration30
- Tool integration30
- Tool interoperability30
- Workflows30
- Bottom-up proteomics27
- Discovery proteomics27
- MS-based targeted proteomics27
- MS-based untargeted proteomics27
- Metaproteomics27
- Peptide identification27
- Protein and peptide identification27
- Protein bioinformatics27
- Show N_FILTERS more
- Operation
- Annotation9
- Data visualisation5
- Molecular visualisation5
- Plotting5
- Rendering5
- Visualisation5
- Functional enrichment analysis4
- GSEA4
- Gene set analysis4
- Gene-set enrichment analysis4
- Gene-set over-represenation analysis4
- Methylation analysis4
- Methylation profile analysis4
- Allele calling3
- Exome variant detection3
- Genome variant detection3
- Germ line variant calling3
- Mutation detection3
- Somatic variant calling3
- Variant calling3
- Variant mapping3
- de novo mutation detection3
- Data handling2
- File handling2
- File processing2
- Peptide database search2
- Peptide identification2
- Peptide-spectrum-matching2
- Processing2
- Report handling2
- Utility operation2
- Image analysis1
- Show N_FILTERS more
- Tool
- Bioconductor241
- BridgeDb4
- Chipster4
- Data Stewardship Wizard3
- BridgeDbR2
- InterMine2
- InterMineR2
- RDMkit2
- BridgeDb API1
- CARNIVAL1
- CellNOptR1
- Cufflinks1
- Cytoscape1
- Data Information System (DAISY)1
- HumanMine1
- MSFragger1
- MouseMine1
- PathVisio1
- ProteinProspector1
- RCy31
- TargetMine1
- UCSC Genome Browser1
- WikiPathways1
- Show N_FILTERS more
- Standard database or policy
- NCBI Gene4
- Bioconductor3
- Ensembl3
- BRENDA1
- BridgeDb1
- Chemical Entities of Biological Interest1
- Gene3D1
- Genomics England | PanelApp1
- HumanMine1
- Identifiers.org Registry1
- Integrated resource of protein families, domains and functional sites1
- Observational Medical Outcomes Partnership Standard Vocabulary1
- PRINTS1
- SUPERFAMILY1
- Stress Knowledge Map1
- Structural Classification Of Proteins1
- The Human Metabolome Database1
- The Observational Medical Outcomes Partnership Common Data Model1
- Wikidata1
- WorkflowHub1
- eNanoMapper Ontology1
- i2b2-patient_visit_dimensions1
- Show N_FILTERS more
- Content provider
- Glittr.org510
- European Bioinformatics Institute (EBI)479
- Bioconductor242
- GTN125
- GOBLET109
- IFB French Institute of Bioinformatics109
- SIB Swiss Institute of Bioinformatics80
- Bioinformatics Visualization72
- Software Carpentry70
- NGS Registry60
- ERGA Knowledge Hub55
- de.NBI35
- Data Carpentry34
- Khan Academy Statistics32
- BY-COVID31
- VIB Bioinformatics Core29
- Bioinformatics and Biomathematics Training Hub23
- Coursera19
- VBCF BioComp19
- CSC - IT Center for Science10
- Bioschemas9
- VHP4Safety9
- eNanoMapper9
- Genome 3D8
- InterMine7
- ELIXIR6
- NanoCommons6
- Centre for Genomic Regulation (CRG)5
- LIPID MAPS5
- UNIVERSE-HPC project5
- COG-Train4
- Department of Bioinformatics - BiGCaT, Maastricht University4
- Proteomics Academy4
- ELIXIR AAI3
- ELIXIR Norway3
- ELIXIR: The Czech Republic Node3
- PerMedCoE3
- VIB Training & Conferences3
- Australian BioCommons2
- Barcelona Supercomputing Center (BSC)2
- BioData.pt2
- CINECA PROJECT2
- DTLS - Dutch Techcentre For Life Sciences2
- ELIXIR Luxembourg2
- ELIXIR Portugal2
- Biomedical Sciences Research Center "Alexander Fleming"1
- CNAG-CRG1
- Danish National Health Data Science Sandbox1
- EMBL-ABR1
- ExCALIBUR1
- Future Learn1
- NBIS1
- NYU Langone Health1
- UCLouvain Bioinformatics Platform1
- University of Cambridge Bioinformatics Training1
- WikiPathways1
- Show N_FILTERS more
- Keyword
- R199
- Genomics94
- Python79
- RNA-seq77
- Transcriptomics76
- Next generation sequencing67
- Statistics47
- Data management46
- Data science44
- Reproducibility38
- FAIR data35
- Rare Diseases & Research35
- Unix/Linux34
- Machine learning33
- Single-cell sequencing33
- Data visualization32
- training31
- Galaxy30
- Genome28
- Metagenomics28
- Molecular28
- QC28
- Version control28
- Alignment27
- Bioinformatics27
- biohackaton 201827
- Variant analysis24
- Workflows24
- FAIR22
- BAM20
- Phylogenetics20
- RNA-Seq20
- Differential-expression19
- Genome assembly19
- Pre-processing19
- Annotation18
- FASTQ18
- General18
- life-sciences18
- Containerization16
- NGS16
- R-programming16
- Docker15
- Anatomy Physiology and Atlases14
- Earlham Institute14
- Microbiology14
- Programming14
- Statistical-model14
- Exploratory-analysis13
- Pathway13
- Shell13
- Spatial transcriptomics13
- ChIP-Seq12
- Cloud computing12
- Introduction12
- Nextflow12
- health-informatics12
- Cells and Organisms11
- Europe PMC11
- Expression-estimation11
- Genome annotation11
- High performance computing11
- Introduction bioinformatics11
- Long read sequencing11
- genes and genomes11
- plant phenotyping11
- Extras10
- FAIRsharing10
- Feature-summarisation10
- Literature search10
- Python biologists10
- data management10
- databases10
- Comparative genomics9
- Git9
- Intro9
- Rmarkdown9
- Workshop9
- computer-science9
- next generation sequencing9
- policies9
- reproducibility9
- standards9
- Artificial intelligence8
- Biomedical Literature8
- ChIP-seq8
- Epidemiology8
- Experimental-design8
- GFF38
- Inferential statistics8
- PDBe8
- Pathways and Networks8
- Populations8
- Populus-tremula8
- Proteomics8
- Quarto8
- Regex8
- Snakemake8
- algorithms8
- bioinformatics8
- Show N_FILTERS more
- Competency level
- Not specified2330
- Beginner109
- Intermediate69
- Advanced22
- Show N_FILTERS more
- Licence
- License Not Specified
- Creative Commons Attribution 4.0 International1242
- Creative Commons Attribution Share Alike 4.0 International144
- MIT License130
- GNU General Public License v3.0 only50
- Creative Commons Attribution Non Commercial No Derivatives 4.0 International45
- Creative Commons Zero v1.0 Universal43
- Creative Commons Attribution Non Commercial Share Alike 4.0 International41
- Other (Not Open)24
- Apache License 2.018
- Other (Non-Commercial)15
- BSD 3-Clause "New" or "Revised" License14
- Creative Commons Attribution Non Commercial 4.0 International12
- Other (Attribution)6
- Creative Commons Attribution 1.0 Generic5
- CeCILL Free Software License Agreement v2.13
- Creative Commons Attribution No Derivatives 4.0 International3
- Other (Open)3
- Artistic License 2.02
- GNU Affero General Public License v3.0 only2
- GNU General Public License v2.0 only2
- Academic Free License v3.01
- Creative Commons Attribution 2.0 Generic1
- Creative Commons Attribution No Derivatives 2.0 Generic1
- Creative Commons Attribution Non Commercial 2.0 Generic1
- Do What The F*ck You Want To Public License1
- Open Data Commons Attribution License v1.01
- The Unlicense1
- Show N_FILTERS more
- Target audience
- Researchers177
- PhD students170
- Biologists, Genomicists, Computer Scientists167
- Post-Doctoral Fellows161
- Clinicians121
- Graduate students85
- Graduate Students77
- Life Science Researchers45
- post-docs45
- Novice44
- Intermediate26
- Biologists25
- beginner bioinformaticians22
- bioinformaticians16
- Bench biologists15
- health professionals13
- Beginners13
- healthcare professionals12
- Health Care Professionals8
- Patient Advocates 8
- rare disease patients representatives7
- PhD6
- Scientists6
- biocurators6
- Trainers5
- postdocs5
- postgrad5
- software developers, bioinformaticians5
- Bioinformaticians4
- Biomedical researchers4
- Clinical Scientists4
- General Interest4
- Laboratory technicians4
- Post Docs4
- Undergraduate students4
- Veterinarians4
- data stewards4
- General Physicians3
- PhD Students3
- Researchers and bioinformaticians in other projects interested in depositiong data at the EGA3
- data managers3
- medical students3
- postdoc3
- research software engineers and researchers writing code3
- researchers3
- Genomics data science PhD students2
- Healthcare2
- Master students2
- PhD Scholars, Graduates and Post Graduates, Professors, Associate Professors, Assistant Professors, Bio instruments Professionals, Bio-informatics Professionals, Directors, CEO’s of Organizations, Supply Chain companies, Manufacturing Companies, Software development companies, Research Institutes and members2
- PhD candidates2
- Postgraduate students2
- Researcher in life sciences2
- Toxicologists2
- biology and bioinformatics sophomore undergraduates2
- geneticists2
- genomics researchers2
- life scientists2
- plant researchers2
- postdoctoral researchers2
- scientific researchers, public health professionals and clinicians 2
- service administrators in organizations that want to make use of ELIXIR AAI 2
- Academia/ Research Institution1
- All postgraduates1
- Anyone interested in simulation of metabolic models, and in PerMedCoE tools and activities1
- Anyone wants to start using the Unix/Linux OS1
- Bachelor students1
- Beginner1
- Beginner informatics1
- Biochemists1
- Bioinformatician1
- Bioinformatics1
- Biologists with little or no prior computational experience1
- Bioscientists1
- Biotechnology Companies1
- Chemists1
- Cloud users1
- Data Access Committeses from the EGA1
- Data Managers1
- Developers1
- Educators1
- Fellows and Residents1
- Grad students1
- Healthcare professionals1
- High School Students1
- Industry1
- Lecturers1
- Life sciences1
- Life scientists1
- Microbiologists1
- Neurological1
- Neurologists1
- Non-Profit Organisation1
- Ontologists1
- Operators, developers and managers of bioinformatics resources1
- Paediatricians1
- PhD students, computer scientists, bioinformaticians and developers who need to maintain/extend existing tools or develop new tools for Galaxy. 1
- Policy makers1
- Postgraduate Students1
- Primary care doctors1
- Professors1
- Show N_FILTERS more
- Author
- Martin Morgan96
- SIB Swiss Institute of Bioinformatics80
- The Carpentries Incubator52
- bioinformatics.ca35
- bebatut32
- bgruening32
- Michelle Brazas21
- Teaching materials at the Harvard Chan Bioinformatics Core21
- The Gulbenkian Training Programme in Bioinformatics20
- Terri Attwood18
- András Aszódi17
- Data Carpentry17
- shiltemann17
- NBIS - National Bioinformatics Infrastructure Sweden14
- Wandrille Duchemin14
- nekrut14
- Jenny Drnevich @jenny12
- Geert van Geest11
- Mathieu Bourgey11
- Various11
- Canadian Bioinformatics Workshops10
- Egon Willighagen10
- Paul Yorke10
- David Wishart9
- Jared Simpson9
- allegra.via Via9
- Bastian Schiffthaler @bastian8
- Boris Steipe8
- CRUK CI Bioinformatics Core8
- Eija Korpelainen8
- Malachi Griffith8
- Nicolas Delhomme @delhomme8
- pajanne8
- Maria Levchenko7
- Vincent Carey7
- Wolfgang Huber7
- joachimwolff7
- nsoranzo7
- stortebecker7
- Anna Poetsch6
- Bernardo Clavijo6
- Biocore@CRG6
- Dayane Araujo6
- Levi Waldron6
- Michael Lawrence6
- Michael Love6
- Philippe Le Mercier6
- Richard Smith-Unna6
- Simon Anders6
- Software Carpentry6
- erasche6
- erxleben6
- jmchilton6
- slugger706
- tnabtaf6
- Aidan Budd5
- Bioinformatics, Rockefeller University5
- Brian Haas5
- Deepak Tanwar5
- Fouad Yousif5
- Gary Bader5
- Guillaume Bourque5
- Hadley Wickham5
- Jeremy Cohen5
- Jessica Kirkpatrick [email protected]5
- Laurent Gatto5
- Lori Shepherd5
- Manuel Corpas5
- Maria Lehtivaara5
- Marie-Claude Blatter5
- MolSSI Education5
- Radhika Khetani @radhika5
- Robin Engler5
- Robin Haw5
- Sergio Martínez Cuesta5
- Sonali Arora5
- Steve Crouch5
- The Carpentries Lab5
- Thuong Van Du Tran5
- Will Hsiao5
- blankclemens5
- posit-conf-20235
- yvanlebras5
- Alex's Lemonade Stand Foundation4
- BioNT Training4
- Bori Mifsud4
- Computational Biology and Bioinformatics at UCLouvain4
- Elisabeth Gasteiger4
- Frederik Coppens @frcop4
- Gary Van Domselaar4
- Hervé Pagès4
- Kathi Zarnack4
- Mark Fernandes4
- Markus Müller4
- Mike Smith4
- Our core educator team can be found on our course page.4
- Rami Krispin4
- Sorana Morrissy4
- Stephanie Hicks4
- Various authors4
- Show N_FILTERS more
- Contributor
- Toby Hodges80
- François Michonneau69
- Erin Becker63
- Zhian N. Kamvar59
- Katrin Leinweber54
- Raniere Silva53
- Tracy Teal53
- W. Trevor King52
- Andy Boughton51
- maneesha51
- Katie Anne Mills48
- Maxim Belkin48
- David Pérez-Suárez44
- Gabriel A. Devenyi44
- Canadian Bioinformatics Workshops43
- Abby Cabunoc Mayes42
- EvanWill42
- Ian Lee42
- Jon Pipitone42
- Jonah Duckles42
- Michael Hansen42
- Piotr Banaszkiewicz42
- Brandon Curtis41
- David Mawdsley41
- Jemma Stachelek41
- Remi Rampin41
- Allen Lee40
- Andrew Sanchez40
- Michael R. Crusoe40
- Greg Wilson39
- Jeff Oliver39
- Joel Nothman39
- Nick Young39
- naught10139
- James Allen38
- Rémi Emonet38
- William L. Close38
- Rayna M Harris37
- Sarah Brown35
- Gerard Capes34
- trk31
- Renato Alves30
- Ana Conrado29
- K.E. Koziar29
- Stephan Druskat29
- Alex Whan27
- Christina K.27
- Paula Andrea Martinez26
- Michael Joseph25
- Anthony Gitter24
- João Rodrigues24
- Robert Davey22
- Sarah Stevens22
- Henry Schreiner20
- Hilmar Lapp20
- The Gulbenkian Training Programme in Bioinformatics19
- Paola Prieto18
- Aaron O'Leary17
- C. Titus Brown17
- Mine Cetinkaya-Rundel17
- Trevor Bekolay16
- Benson Muite15
- John Blischak15
- Annajiat Alim Rasel14
- Bianca Peterson14
- Lex Nederbragt14
- Radhika Khetani14
- Will Gammerdinger14
- Karen Word13
- Laurent Gatto13
- Mateusz Kuzak13
- Meeta Mistry13
- Wolmar Nyberg Åkerström13
- zhibinlu13
- Andrew Reid12
- Ethan White12
- JCSzamosi12
- Mark Fernandes12
- Ariel Rokem11
- Ivan Gonzalez11
- Jason Williams11
- Karen Cranston11
- Kilian Lieret11
- Kunal Marwaha11
- Miguel Cardoso11
- Pete11
- Pete Bachant11
- Trevor Keller11
- Amy Brown10
- Edward Wallace10
- Hugo Tavares10
- Jihe Liu10
- Kari L. Jordan, PhD10
- Stéphane Guillou10
- Taylor Reiter10
- YvonneKallberg10
- Alan O'Callaghan9
- Aleksandra Nenadic9
- Amanda Charbonneau9
- Anelda van der Walt9
- Show N_FILTERS more
- Resource type
- Recorded webinar302
- e-learning162
- Video98
- Tutorial97
- Course materials53
- Talk53
- Webinar53
- Slides21
- video16
- Poster14
- Slideshow12
- course materials12
- Training materials11
- Presentation7
- Documentation6
- PDF5
- FREE online course4
- online modules4
- podcast4
- Life Sciences Literature Database3
- slides3
- Series of videos2
- Bioinformatics2
- Coding2
- Computational Biology2
- Computer Science2
- Education2
- Programming2
- Scripts2
- youtube video2
- Blog post1
- Computer Software1
- Data Science1
- E-Learning1
- Exercise1
- Handout1
- How-to guide1
- Learning pathway1
- Life Science Literature Database1
- Machine Learning1
- Notes1
- Tool1
- Toolkit1
- Transcriptomics1
- Vignette1
- ViralZone1
- educational materials1
- hands-on tutorial1
- knowledgebase1
- online tutorial1
- presentation1
- tutorial1
- Show N_FILTERS more
- Related resource
- Input datasets34
- Associated slides9
- Development in Galaxy slides6
- Proteomics dataset5
- Sequence analysis dataset5
- Transcriptomics dataset5
- Assembly dataset4
- Variant Analysis dataset4
- Assembly slides3
- ChIP-Seq data analysis dataset2
- Epigenetics dataset2
- Galaxy Server administration slides2
- Genome Annotation dataset2
- Metagenomics dataset2
- Sequence analysis slides2
- Beacon v2: a discovery tool for genomic and pheno-clinical data1
- COBRA Toolbox1
- Chipster1
- Contributing to the Galaxy Training Material slides1
- Data Stewardship Wizard1
- DisGeNET: a discovery platform designed to address a variety of questions concerning the genetic underpinning of human diseases1
- EGA Submitter Portal Tutorial1
- ELIXIR's Impact Toolkit1
- GPAP: the RD-Connect Genome-Phenome Analysis Platform for diagnosis and gene discovery in rare disease research1
- Genome Annotation slides1
- Genomics England PanelApp1
- Introduction to Galaxy Analyses dataset1
- Introduction to Galaxy dataset1
- Introduction to the EGA and sharing sensitive data1
- OpenCloning1
- Recoding1
- Research Data Management in Life Sciences1
- Slides1
- Slides | Beacon v2: a discovery tool for genomic and pheno-clinical data1
- Slides | DisGeNET: a discovery platform designed to address a variety of questions concerning the genetic underpinning of human diseases1
- Slides | GPAP: the RD-Connect Genome-Phenome Analysis Platform for diagnosis and gene discovery in rare disease research1
- Slides | Introduction to the EGA and sharing sensitive data1
- Statistics dataset1
- Transcriptomics slides1
- User Interface and Features dataset1
- VEIS webinar: The essentials of DUO codes | Presentation1
- VEIS webinar: The essentials of DUO codes | Video1
- Video of the course1
- Show N_FILTERS more
- Node
- Switzerland677
- EMBL-EBI483
- France112
- United Kingdom100
- Belgium38
- Germany37
- Czech Republic21
- Netherlands20
- Finland14
- Spain10
- Portugal7
- Norway4
- Luxembourg3
- Slovenia3
- Greece2
- Sweden2
- Israel1
- Italy1
- Show N_FILTERS more
- Collection
- PHENotyping and EnviroTyping (PHENET training collection)19
- ELIXIR Toxicology Community9
- PINK project9
- ELIXIR Federated Human Data Community7
- Byte-sized RSE series5
- ELIXIR SIS-Containers - collection of training materials4
- ELIXIR Systems Biology Community: training events and materials4
- Single-cell Omics Community - collection of courses and materials4
- VEIS - Value of the EGA for Industry and Society4
- ELIXIR Biodiversity Community3
- Impact of research infrastructures2
- Show N_FILTERS more
- Status
- Active46
- Under development1
- Show N_FILTERS more
Show materials from all spaces
Show disabled materials
Hide materials with broken links
Show archived materials

Training materials

Register training material

Licence: License Not Specified

and Include broken links: true

2530 materials found

Results per page:

1
2
…
130
131
132
133
134
135
136
137
138
…
252
253