Materials - TeSS (Training eSupport System)

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- Scientific topic
- Data management27
- Metadata management27
- Research data management (RDM)27
- Protein bioinformatics26
- Protein databases26
- Protein informatics26
- Proteins26
- Protein structure21
- Protein structure analysis21
- Protein tertiary structure21
- Function analysis20
- Functional analysis20
- Protein function analysis20
- Protein function prediction20
- Data archival18
- Data archiving18
- Data curation18
- Data curation and archival18
- Data preservation18
- Database curation18
- Research data archiving18
- Biomathematics17
- Computational biology17
- Mathematical biology17
- Theoretical biology17
- Antimicrobial stewardship16
- Bioinformatics16
- Comparative transcriptomics16
- Medical microbiology16
- Microbial genetics16
- Microbial physiology16
- Microbial surveillance16
- Microbiological surveillance16
- Microbiology16
- Molecular infection biology16
- Molecular microbiology16
- Transcriptome16
- Transcriptomics16
- Active learning15
- Community analysis15
- Ensembl learning15
- Environmental microbiology15
- Kernel methods15
- Knowledge representation15
- Machine learning15
- Microbial ecology15
- Microbiome15
- Molecular community analysis15
- Molecular diagnostics15
- Neural networks15
- Personalised medicine15
- Precision medicine15
- Recommender system15
- Reinforcement learning15
- Structural assignment15
- Structural biology15
- Structural determination15
- Structure determination15
- Supervised learning15
- Unsupervised learning15
- Chemical biology14
- Applied ontology13
- Exometabolomics13
- LC-MS-based metabolomics13
- MS-based metabolomics13
- MS-based targeted metabolomics13
- MS-based untargeted metabolomics13
- Mass spectrometry-based metabolomics13
- Metabolites13
- Metabolome13
- Metabolomics13
- Metabonomics13
- NMR-based metabolomics13
- Ontologies13
- Ontology13
- Ontology and terminology13
- Ontology relations13
- Terminology13
- Upper ontology13
- Exomes12
- Genome annotation12
- Genomes12
- Genomics12
- Metagenomics12
- Personal genomics12
- Shotgun metagenomics12
- Synthetic genomics12
- Viral genomics12
- Whole genomes12
- Bibliography11
- Citations11
- Documentation11
- Language11
- Literature11
- Literature and language11
- References11
- Scientific literature11
- DNA variation10
- Drug discovery10
- Genes10
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- Operation
- Quality control1
- Validation1
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- Tool
- MGnify (was EBI Metagenomics)3
- Ontology Lookup Service3
- Zooma2
- ChEBI1
- MGnify1
- MaBoSS1
- REDCap1
- WebMaBoSS1
- biovalidator1
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- Standard database or policy
- OBO Foundry2
- FAIR sharing1
- The European Genome-phenome Archive1
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- Content provider
- European Bioinformatics Institute (EBI)489
- CINECA PROJECT17
- ELIXIR2
- ELIXIR-SI eLearning Platform (EeLP)1
- PerMedCoE1
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- Keyword
- Europe PMC13
- Introduction12
- Literature search12
- Biomedical Literature8
- Ontologies8
- PDBe8
- Protein families7
- Genome sequencing6
- Sequence alignments6
- Variants6
- API5
- Data management5
- Metadata5
- Network analysis5
- Programmatic access5
- Small molecules5
- Standards5
- Systems biology5
- FAIR4
- Gene transcripts4
- MGnify4
- Macromolecular structures4
- Metabolome4
- Microarray4
- Text mining4
- data harmonization4
- Annotation3
- Annotations3
- Chemical compounds3
- Cohort data3
- Data integration3
- Data links3
- EOSC-Life3
- EVA3
- HMMs3
- Literature database search3
- Metabolites3
- Metagenomics3
- Microbiology3
- Open access3
- Pathway database3
- Profile Hidden Markov models3
- Protein classification3
- Protein function3
- Artificial intelligence2
- BioMart2
- Biochemical pathways2
- Biocuration2
- Biocurators2
- Biomedical data2
- Controlled vocabulary2
- Data2
- Data managment plan2
- Data standards2
- EGA2
- ELSI2
- Enzymes2
- Ethics2
- Europe PMC, Preprints2
- FAIR data2
- FAIR principles2
- Functional annotation2
- GWAS2
- Galaxy2
- Genome annotations2
- Genome3D2
- Human genetic variation2
- IMPC2
- Literature2
- Mathematical modelling2
- Microscopy2
- Multiple sequence alignments2
- NGS2
- NMR spectroscopy2
- Next-generation sequencing2
- Open Targets2
- Open science2
- Phylogenetic profiling2
- Protein domain prediction2
- Protein sequences2
- Protein signature models2
- Protein-protein interaction networks2
- Python2
- R2
- REST API2
- Sequence Analysis2
- Standardised vocabulary2
- Sustainability2
- Swiss-Prot2
- TrEMBL2
- UniProtKB2
- federated data analysis2
- metadata2
- ncRNA2
- Beacon queries1
- Text mining1
- AAI 1
- AMR1
- ArrayExpress1
- Auhtorisation1
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- Competency level
- Not specified486
- Beginner18
- Intermediate8
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- Licence
- License Not Specified479
- Creative Commons Attribution Non Commercial Share Alike 4.0 International17
- Creative Commons Attribution Share Alike 4.0 International10
- Creative Commons Attribution 4.0 International5
- Creative Commons Attribution Non Commercial No Derivatives 4.0 International1
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- Target audience
- Clinicians119
- PhD students119
- Life Science Researchers4
- Life Scientists3
- Anyone interested in data standardization and/or the ontology approach (i.e. public, end users).2
- biocurators2
- life scientists2
- software developers, bioinformaticians2
- Beginners1
- Modellers1
- Operators, developers and managers of bioinformatics resources1
- Research scientists1
- Researcher in life sciences1
- Scientists1
- Scientists who want to optimise their literature searches1
- This webinar is aimed at scientists with an interest in learning more about the Europe PMC and optimising their literature searches.1
- Wet-lab researchers and bioinformaticians who want to access scientific literature and data programmatically.1
- bioinformaticians1
- programmers1
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- Author
- Maria Levchenko8
- Dayane Araujo7
- Marta Lloret Llinares5
- Emma Griffiths4
- Rob Finn3
- Alex Mitchell2
- Varsha Kale2
- Allyson Lister1
- Anastasia Chasapi1
- Aravind Venkatesan1
- Carlos Martinez Ortiz1
- Dalia Alghamdi1
- Daniel Wibberg1
- Denise Carvalho-Silva1
- ELIXIR1
- Ewan Birney1
- Federico Bianchini1
- Francesco Talo1
- Frédéric Haziza1
- Fuqi Xu1
- Germana Baldi1
- Grégoire Rossier1
- Guillermo Rangel Pineros1
- Helena Schnitzer1
- Henriette Harmse1
- Jacob Rasmussen1
- Jaelle Brealey1
- Jessica Lindvall1
- Jonathan Dursi1
- Jordi Rambla1
- Kees van Bochove1
- Keeva Cochrane1
- Kirill Tsukanov1
- Lorna Richardson1
- Luc Mottin1
- Madhumiethaa Jayaprabha Palanisamy1
- Magnus Palmblad1
- Marco Ruscone1
- Marcos Casado Barbero1
- Marta Teperek1
- Martin Hansen1
- Melanie Pajero1
- Michael Crusoe1
- Michaela Th. Mayrhofer1
- Mijke Jetten1
- Mikael Linden1
- Morten Limborg1
- Namrata Kale1
- Nancy George1
- Nazeefa Fatima1
- Ola Tarkowska1
- Pablo Moreno1
- Patricia Palagi1
- Paulette Lieby1
- Rebecca Campos1
- Rob Hooft1
- Romain Tanzer1
- Sandy Rogers1
- Sarah Jones1
- Sijin He1
- Simon Jupp1
- Sirarat Sarntivijai1
- Sofia Marcos1
- Tony Burdett1
- Vilem Ded1
- Vincent Noël1
- Will Hsiao1
- Yasemin Türkyilmaz-van der Velden1
- Zunaira Shafique1
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- Contributor
- Michael Parkin3
- Alex Mitchell2
- Lorna Richardson2
- Rob Finn2
- Alvaro Gonzalez1
- Anna Fotaki1
- Aravind Venkatesan1
- Daniel Thomas Lopez1
- ELIXIR-CONVERGE WP2 members1
- Elisabeth Busch1
- Francesco Talo1
- Guillermo Rangel Pineros1
- Marta Lloret-Llinares1
- Michael Crusoe1
- Ola Tarkowska1
- Rebecca Campos1
- Shyam Gopalakrishnan1
- Stefan Negru1
- Teemu Kataja1
- Varsha Kale1
- Yogmatee Rochun1
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- Resource type
- Recorded webinar299
- e-learning117
- Course materials47
- Video20
- Webinar13
- Life Sciences Literature Database3
- hands-on tutorial3
- Series of videos2
- Slidedeck2
- Slides2
- Tutorial2
- Installation instructions1
- Life Science Literature Database1
- Manual1
- Online material1
- Presentation1
- Recording1
- Toolkit1
- Training materials1
- Workshop1
- course materials1
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- Related resource
- CanCOGeN1
- ENA1
- FAIRplus FAIRification wizard1
- GEEM1
- Galaxy project guided tours1
- HoloFood Project1
- MGnify1
- MetaboLights1
- Next generation biobanking ontology (NGBO)1
- Public Health Alliance for Genomic Epidemiology1
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- Node
- EMBL-EBI
- Switzerland1114
- United Kingdom226
- France158
- Belgium85
- Netherlands85
- Germany43
- Czech Republic31
- Portugal30
- Estonia22
- Finland21
- Spain21
- Sweden17
- Cyprus16
- Slovenia16
- Norway13
- Luxembourg9
- Denmark7
- Italy7
- Greece4
- Israel1
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- Collection
- ELIXIR Systems Biology Community: training events and materials4
- ELIXIR Federated Human Data Community3
- ELIXIR Biodiversity Community1
- Impact of research infrastructures1
- PINK project1
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- Status
- Active7
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