Training materials
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Introduction to RNA-Seq Using Galaxy: Studying the transcriptome
•• IntermediateRNA RNA-Seq John Innes Centre JIC -
Galaxy for NGS analysis: A web-based platform for data intensive biological research
Bioinformatics Nucleic acid sequence analysis High-throughput sequencing Workflows John Innes Centre JIC
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Introduction to R and Bioconductor lecture
R-programming
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RNA-seq module Frederik Coppens
HTS-introduction
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RNA-seq module Frederik Coppens
FASTQ Alignment BAM Differential-expression Statistical-model Exploratory-analysis
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ChIP-seq analysis using R - Experimental design and peak calling.
ChIP-Seq Experimental-design Peak-calling Visualisation
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ChIP-seq analysis using R
ChIP-Seq Experimental-design Peak-calling Differential-binding Visualisation Annotation Homo-sapiens R-programming
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ChIP-seq analysis using R - Experimental design and peak calling.
ChIP-Seq Experimental-design Peak-calling Visualisation
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ChIP-seq analysis using R - Quality Control
RNA-Seq ChIP-Seq RNA-Seq QC Data-format Experimental-design
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ChIP-seq analysis using R - File formats and QC
RNA-Seq ChIP-Seq RNA-Seq QC Data-format Experimental-design