Training materials
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e-learning
Assembly of metagenomic sequencing data
• BeginnerMicrobial ecology Metagenomics Sequence assembly Microbiome assembly metagenomics microgalaxy -
e-learning
16S Microbial Analysis with mothur (short)
• BeginnerMetagenomics Microbial ecology Taxonomy Sequence analysis Metabarcoding 16S Microbiome metabarcoding microgalaxy -
e-learning
Clean and manage Sanger sequences from raw files to aligned consensus
• BeginnerSequence analysis Sequence analysis -
e-learning
Screening assembled genomes for contamination using NCBI FCS
• BeginnerSequence analysis Sequence analysis -
e-learning
Scanpy Parameter Iterator
• BeginnerSingle Cell single-cell -
e-learning
Ploting a Microbial Genome with Circos
•• IntermediateVisualisation -
e-learning
CUT&RUN data analysis
• BeginnerEpigenomics Epigenetics -
e-learning
ERGA post-assembly QC
• BeginnerSequence assembly Genomics Biodiversity Assembly QC animals assembly biodiversity genome plants -
e-learning
Secondary metabolite discovery
• BeginnerGenomics Genome Annotation -
slides
Identification of non-canonical ORFs and their potential biological function
• BeginnerTranscriptomics Transcriptomics