- Home
- Materials
Filter
Sort
-
-
Filter Clear filters
-
-
Scientific topic
- Transcriptome profiling
- Data management234
- Metadata management234
- Research data management (RDM)234
- Genome annotation230
- Exomes208
- Genomes208
- Genomics208
- Personal genomics208
- Synthetic genomics208
- Viral genomics208
- Whole genomes208
- Comparative transcriptomics191
- Transcriptome191
- Transcriptomics191
- MicroRNA sequencing173
- RNA sequencing173
- RNA-Seq173
- RNA-Seq analysis173
- Small RNA sequencing173
- Small RNA-Seq173
- Small-Seq173
- WTSS173
- Whole transcriptome shotgun sequencing173
- miRNA-seq173
- FAIR data164
- Findable, accessible, interoperable, reusable data164
- R153
- R program153
- R script153
- Bayesian methods148
- Biostatistics148
- Descriptive statistics148
- Gaussian processes148
- Inferential statistics148
- Markov processes148
- Multivariate statistics148
- Probabilistic graphical model148
- Probability148
- Statistics148
- Statistics and probability148
- Algorithms129
- Computer programming129
- Data structures129
- Programming languages129
- Software development129
- Software engineering129
- High-throughput sequencing116
- Chromosome walking115
- Clone verification115
- DNA-Seq115
- DNase-Seq115
- High throughput sequencing115
- NGS115
- NGS data analysis115
- Next gen sequencing115
- Next generation sequencing115
- Panels115
- Primer walking115
- Sanger sequencing115
- Sequencing115
- Targeted next-generation sequencing panels115
- Active learning91
- Ensembl learning91
- Kernel methods91
- Knowledge representation91
- Machine learning91
- Neural networks91
- Recommender system91
- Reinforcement learning91
- Supervised learning91
- Unsupervised learning91
- Bioinformatics90
- Metagenomics80
- Shotgun metagenomics80
- Python78
- Python program78
- Python script78
- py78
- Bottom-up proteomics75
- Discovery proteomics75
- MS-based targeted proteomics75
- MS-based untargeted proteomics75
- Metaproteomics75
- Peptide identification75
- Protein and peptide identification75
- Proteomics75
- Quantitative proteomics75
- Targeted proteomics75
- Top-down proteomics75
- Biodiversity69
- Single-cell genomics62
- Single-cell sequencing62
- Data rendering61
- Data visualisation61
- Antimicrobial stewardship56
- Medical microbiology56
- Microbial genetics56
- Microbial physiology56
- Microbial surveillance56
- Show N_FILTERS more
-
-
-
Operation
- Biological network analysis1
- Biological network modelling1
- Biological network prediction1
- Data handling1
- File handling1
- File processing1
- Network analysis1
- Network comparison1
- Network modelling1
- Network prediction1
- Network simulation1
- Network topology simulation1
- Processing1
- RNA-Seq analysis1
- Report handling1
- Utility operation1
- Show N_FILTERS more
-
-
-
Content provider
- Glittr.org101
- Bioconductor21
- NGS Registry19
- ERGA Knowledge Hub11
- European Bioinformatics Institute (EBI)7
- CSC - IT Center for Science4
- VIB Bioinformatics Core2
- Bioinformatics and Biomathematics Training Hub1
- Centre for Genomic Regulation (CRG)1
- Pattern Institute1
- PerMedCoE1
- UCLouvain Bioinformatics Platform1
- Show N_FILTERS more
-
-
-
Keyword
- RNA-seq114
- Transcriptomics96
- Single-cell sequencing49
- Next generation sequencing38
- R32
- RNA-Seq21
- Genomics20
- QC15
- Alignment11
- BAM10
- Pre-processing10
- Unix/Linux10
- FASTQ9
- General9
- Differential-expression8
- Expression-estimation8
- Populus-tremula8
- Python8
- Variant analysis8
- Annotation7
- GFF37
- Genome annotation6
- Statistics6
- ATAC-seq5
- ChIP-seq5
- Data visualization5
- Epigenetics5
- R-programming5
- Reproducibility5
- Spatial transcriptomics5
- ChIP-Seq4
- Data-format4
- Nextflow4
- Pathways and Networks4
- Statistical-model4
- Version control4
- Data management3
- Experimental-design3
- Exploratory-analysis3
- Feature-summarisation3
- Long read sequencing3
- Quality Control3
- Single Cell technologies3
- Snakemake3
- Workflows3
- scRNA-seq3
- RNA-Seq2
- Containerization2
- Data science2
- Galaxy2
- Genome assembly2
- High performance computing2
- Machine learning2
- Multiomics2
- Quarto2
- Rmarkdown2
- Assembly1
- BIoinformatics1
- Cloud computing1
- Comparative genomics1
- DNA-protein interaction1
- Differential Expression1
- Enrichment analysis1
- Epigenetic modifications1
- FAIR data1
- FASTA1
- Functional Genomics1
- Functional enrichment1
- Gene Expression1
- HPC1
- Histone modifications1
- JIC1
- John Innes Centre1
- Julia1
- Metagenomics1
- Microarray1
- NGS1
- Next-generation sequencing1
- PCA1
- Population genetics1
- Proteomics1
- RNA-protein interaction1
- RNAseq, transcriptomics1
- RStudio1
- Real-time PCR1
- Signaling1
- Singularity1
- Visualisation1
- bulk1
- mouse1
- nf-co.re1
- Show N_FILTERS more
-
-
-
Competency level
- Not specified161
- Intermediate7
- Beginner5
- Show N_FILTERS more
-
-
-
Licence
- License Not Specified125
- Creative Commons Attribution 4.0 International12
- GNU General Public License v3.0 only10
- MIT License10
- Creative Commons Zero v1.0 Universal8
- Creative Commons Attribution Share Alike 4.0 International3
- Apache License 2.01
- BSD 3-Clause "New" or "Revised" License1
- Creative Commons Attribution Non Commercial 4.0 International1
- Creative Commons Attribution Non Commercial Share Alike 4.0 International1
- Other (Not Open)1
- Show N_FILTERS more
-
-
-
Target audience
- Biologists5
- PhD students4
- bioinformaticians3
- Life Science Researchers2
- post-docs2
- Bioinformaticians1
- Biologists interested in learning about RNA-seq1
- Clinicians1
- Researchers1
- Students1
- Students, postdocs or RAs who have an interest in bioinformatics and who intend to conduct RNA-Seq analysis on a Galaxy platform1
- beginner bioinformaticians1
- Show N_FILTERS more
-
-
-
Author
- Teaching materials at the Harvard Chan Bioinformatics Core11
- Martin Morgan9
- Bastian Schiffthaler @bastian8
- Nicolas Delhomme @delhomme8
- UC Davis Bioinformatics Core Training Page8
- bioinformatics.ca7
- CRUK CI Bioinformatics Core5
- NBIS - National Bioinformatics Infrastructure Sweden5
- SIB Swiss Institute of Bioinformatics5
- Anna Poetsch4
- The Gulbenkian Training Programme in Bioinformatics4
- Alex's Lemonade Stand Foundation3
- Eija Korpelainen3
- Michael Love3
- Simon Anders3
- The Carpentries Incubator3
- Health Data Science Sandbox2
- Julien Roux2
- Leiden Computational Biology Center2
- Maria Lehtivaara2
- Stefano Mangiola2
- @bastian1
- @delhomme1
- Aedin Culhane1
- Albrectsen B.1
- Alejandro Reyes1
- Amarinder Singh Thind1
- Anmol J. Hemrom1
- Anna Delgado Tejedor1
- Applied Genomics1
- Barbara Hill Meyers and Michael Reich1
- Bartosz Bartmanski1
- Benilton Carvalho1
- Bert Overduin, @bert1
- Bioconductor1
- Biocore@CRG1
- Bishwa Ghimire1
- Boas Pucker1
- BrainOmicsCourse1
- Canadian Bioinformatics Workshops1
- Cellular Genomics Informatics1
- Charlotte Soneson @charlotte, [email protected]1
- Common Fund Data Ecosystem1
- Computational Biology and Bioinformatics at UCLouvain1
- Deplancke's Lab1
- Eija Korpelainen @eija, [email protected]1
- Erasmus Medical Center1
- Fabian Andrade Lozano1
- Fred Hutch Data Science Lab1
- Frederik Coppens, @frcop1
- Functional Genomics Laboratory1
- Genome Informatics Facility1
- Geraldine Van der Auwera1
- Heli Pessa1
- Hvidsten T. R.1
- Ingvarsson P. K.1
- Institut Français de Bioinformatique (IFB)1
- Isabel Duarte1
- Jansson S.1
- Jenny Drnevich @jenny1
- Jessica Kirkpatrick [email protected]1
- Julia Ponomarenko1
- Julie Zhu1
- Katharina Hoff1
- Kelly Street1
- Khushbu Patel1
- Laboratory of Genomics and Bioinformatics1
- Leonard Goldstein1
- Luca Cozzuto1
- Maria Doyle1
- Melbourne Bioinformatics1
- Michael Love et al.1
- Mike Love1
- Monash Data Fluency1
- Mähler N.1
- OSCA Source Code Management1
- Oenskog J.1
- Pachter Lab1
- Python club at University of Algarve1
- Radhika Khetani @radhika1
- Rhonda Bacher1
- Robinson K.1
- Saez Lab1
- Sarah Bonnin1
- Simon Andrews1
- Sonali Arora1
- Stephen Turner1
- Street N. R.1
- Sydney Informatics Hub1
- The Griffith Lab1
- The McDonnell Genome Institute1
- Theis Lab1
- Thomas Denecker1
- Tidy-transcriptomics workshops1
- Toni Hermoso Pulido1
- Xueyi Dong1
- Yunshun Chen1
- based partially on material from Ernest Turro University of Cambridge1
- fmicompbio1
- gladstone-institutes1
- Show N_FILTERS more
-
-
-
Contributor
- Canadian Bioinformatics Workshops8
- Hannah Lyman8
- Will Gammerdinger8
- Radhika Khetani7
- Hugo Tavares6
- Jihe Liu6
- Meeta Mistry6
- Abigail Edwards5
- Eija Korpelainen5
- Geert van Geest5
- Amélie Julé4
- AshKernow4
- Charlotte Soneson4
- Maria Doyle4
- Matt Settles4
- Miguel Cardoso4
- The Gulbenkian Training Programme in Bioinformatics4
- bpdurbin4
- jessyjli4
- marypiper4
- msimoneau4
- Ally Hawkins3
- Ilya Sytchev3
- Jaclyn Taroni3
- Jen O'Malley3
- Joshua Shapiro3
- Julien Roux3
- Kelsy Cotto3
- Laurent Gatto3
- Philipp A.3
- Stephanie J. Spielman3
- Teaching materials at the Harvard Chan Bioinformatics Core3
- ahmedmahfouz3
- eberdan3
- hwick3
- Åsa Björklund3
- Alexandru Mahmoud2
- Candace Savonen2
- Chris Miller2
- Darío Hereñú2
- Deepak Tanwar2
- Edmund Miller2
- Elizabeth Partan2
- Emma Dann2
- Heather Gibling2
- Isabel Duarte2
- Jose Alejandro Romero Herrera2
- Kartik Singhal2
- Koen Van den Berge2
- Lukas Heumos2
- Malachi Griffith2
- Mariam Khanfar2
- Martin Morgan2
- Mohammed2
- My Hoang2
- Noor Sohail2
- Obi Griffith2
- Roy Francis2
- Salehkarim212
- Samuele Soraggi2
- Stefano Mangiola2
- TaniaW2
- Thomas Denecker2
- Toby Hodges2
- Upen Bhattarai2
- Zachary Skidmore2
- actions-user2
- clairetn2
- fgomez022
- hackmd-deploy2
- hxf1900022
- lgeistlinger2
- muneeryaqub2
- sballereau2
- syamauchi20002
- zhibinlu2
- Aaron Lun1
- Abhijna Parigi1
- Aditya Singh1
- Adrija Kalvisa1
- Aedin Culhane1
- Alan O'Callaghan1
- Alba Refoyo Martínez1
- Alberto Valdeolivas1
- Aleksandra E. Badaczewska-Dawid1
- Alessia Valenti1
- Alex Lederer1
- Alex Predeus1
- Alex SMITH1
- Alexander Pico1
- Amanda Charbonneau1
- Amarinder Singh Thind1
- Anders Riutta1
- Andrew Ghazi1
- Andrew Robinson1
- Andrew Severin1
- Anna Schaar1
- Anna Syme1
- Anthony Bretaudeau1
- Anthony Christidis1
- Show N_FILTERS more
-
-
-
Related resource
- RNA-seq data package1
- Show N_FILTERS more
-
-
-
Status
- Active2
- Show N_FILTERS more
-
- Show materials from all spaces
- Show disabled materials
- Hide materials with broken links
- Show archived materials