Materials - TeSS (Training eSupport System)

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- Scientific topic
- Algorithms31
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- Software engineering31
- Comparative transcriptomics12
- Transcriptome12
- Transcriptomics12
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- Statistics and probability10
- Assembly8
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- Bottom-up proteomics4
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- MS-based targeted proteomics4
- MS-based untargeted proteomics4
- Metaproteomics4
- Peptide identification4
- Protein and peptide identification4
- Proteomics4
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- Targeted proteomics4
- Top-down proteomics4
- Exometabolomics3
- LC-MS-based metabolomics3
- MS-based metabolomics3
- MS-based targeted metabolomics3
- MS-based untargeted metabolomics3
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- Metabolites3
- Metabolome3
- Metabolomics3
- Metabonomics3
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- Biological sequences2
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- Tool
- Galaxy42
- FastQC8
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- Cutadapt3
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- FASTX-Toolkit2
- GEMINI2
- NanoPlot2
- QUAST2
- STAR2
- Trim Galore2
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- fastp2
- Apollo1
- BLAST1
- BUSCO1
- BWA1
- BamTools1
- Bandage1
- Biopython1
- Bowtie1
- CellProfiler1
- ChIPpeakAnno1
- Clustal 1.8 (Clustal W, Clustal X)1
- Combine Metaphlan and HUMAnN1
- DESeq21
- European Nucleotide Archive (ENA)1
- FASTQE1
- Falco1
- GECKO1
- Galactic Circos1
- GraPhlAn1
- Heinz1
- IsoformSwitchAnalyzeR1
- JBrowse 21
- MACS1
- MAGeCK1
- Merqury1
- MetaPhlAn1
- PfamScan1
- RSeQC1
- SCANPY1
- SPAdes1
- Salmon1
- SeqCode1
- SortMeRNA1
- StringTie1
- TRANSIT1
- Targetfinder.org1
- UCSC Genome Browser Utilities1
- VelvetOptimiser1
- Workflow4Metabolomics1
- clusterProfiler1
- ewastools1
- export2graphlan1
- gffcompare1
- gffread1
- humann1
- miRDeep21
- pyGenomeTracks1
- pycoQC1
- rnaQUAST1
- seqtk1
- snpEff1
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- xcms1
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- Content provider
- GTN159
- Canadian Bioinformatics Workshops26
- UNIVERSE-HPC project3
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- Keyword
- Development in Galaxy29
- Galaxy Server administration28
- Statistics and machine learning10
- Assembly8
- Single Cell7
- Evolution6
- Genome Annotation6
- Transcriptomics6
- Epigenetics5
- Climate4
- Contributing to the Galaxy Training Material4
- Using Galaxy and Managing your Data4
- Visualisation4
- Image analysis using Deep Learning3
- Introduction to Galaxy Analyses3
- R3
- RSE3
- Research software3
- bioimageio3
- bioinformatics3
- climate3
- image analysis3
- metagenomics3
- prokaryote3
- 16S2
- Foundations of Data Science2
- Metabolomics2
- Microbiome2
- Proteomics2
- Sequence analysis2
- Teaching and Hosting Galaxy training2
- covid192
- microbiome2
- slides2
- tutorial2
- FAIR Data1
- FAIR Data, Workflows, and Research1
- FAIR digital objects1
- Imaging1
- Licences1
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- TeSS1
- Teaching1
- Training materials1
- Variant Analysis1
- Workflows1
- admin1
- ai-ml1
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- and Research1
- bacteria1
- code review1
- coding skills1
- continuous integration1
- data1
- deploying1
- earth-system1
- ecology1
- elixir1
- essential genes1
- features1
- jobs1
- licensing1
- maintenance1
- marine omics1
- ncbi1
- ocean1
- proteomics1
- quantitative proteomics1
- ro-crate1
- single-cell1
- some1
- survey1
- tags1
- tnseq1
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- Competency level
- Beginner141
- Not specified43
- Intermediate7
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- Licence
- Creative Commons Attribution 4.0 International186
- License Not Specified3
- Creative Commons Attribution Share Alike 4.0 International2
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- Target audience
- Students96
- Galaxy Administrators57
- Instructors6
- research software engineers and researchers writing code3
- biologists2
- Librarians1
- Life scientists1
- Trainers1
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- Author
- Helena Rasche32
- Björn Grüning21
- Bérénice Batut21
- Saskia Hiltemann21
- John Chilton20
- Nate Coraor18
- Simon Gladman18
- Anthony Bretaudeau11
- Nicola Soranzo11
- Martin Čech8
- Anne Fouilloux7
- Michael Charleston6
- Anne Pajon4
- Cristóbal Gallardo4
- Dave Clements4
- Kaivan Kamali4
- Mehmet Tekman4
- Yvan Le Bras4
- Alexandre Cormier3
- Andrea Bagnacani3
- Anton Nekrutenko3
- Caterina Fuster-Barceló3
- Cyril Monjeaud3
- Daniel Blankenberg3
- Delphine Lariviere3
- Gildas Le Corguillé3
- Jeremy Cohen3
- Jeremy Goecks3
- Joachim Wolff3
- Junhao Qiu3
- Laura Leroi3
- Paulo Cilas Morais Lyra Junior3
- Steve Crouch3
- Stéphanie Robin3
- Alex Ostrovsky2
- Anika Erxleben2
- Anup Kumar2
- Beatriz Serrano-Solano2
- Christopher Barnett2
- Cécile Canlet2
- Dannon Baker2
- Erwan Corre2
- Jean Iaquinta2
- Julia Jakiela2
- Khai Van Dang2
- Maria Doyle2
- Marius van den Beek2
- Markus Wolfien2
- Mateo Boudet2
- Melanie Föll2
- Michele Maroni2
- Morgan Howells2
- Nadia Goué2
- Olha Nahorna2
- Pratik Jagtap2
- Ryan Abernathey2
- Subina Mehta2
- Valentin Marcon2
- Youri Hoogstrate2
- Abdulrahman Azab1
- Ahmed Hamid Awan1
- Alaa Elghamry1
- Alexander Botzki1
- Anna Syme1
- Anne Siegel1
- Avani Khadilkar1
- Aysam Guerler1
- Basile Goussard1
- Bruna Piereck1
- Catherine Bromhead1
- Chao Zhang1
- Charles Overbeck1
- Chenxin Li1
- Christophe Klopp1
- Clemens Blank1
- Cristina Martins Rodrigues1
- David López1
- Dominik Brilhaus1
- Elin Kronander1
- Elizabeth Sheets1
- Engy Nasr1
- Enis Afgan1
- Esteban Perez-Wohlfeil1
- Fabien Mareuil1
- Florian Heyl1
- Guillaume Gricourt1
- Hervé Ménager1
- Ioana Popescu1
- Jean-François Martin1
- Jean-Loup Faulon1
- Jessica Lindvall1
- Jill Jaworski1
- Joan Hérisson1
- Jon Trow1
- Katarzyna Kamieniecka1
- Kenza Bazi-Kabbaj1
- Kevin Frey1
- Kristen Schroeder1
- Krzysztof Poterlowicz1
- Leily Rabbani1
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- Contributor
- Saskia Hiltemann111
- Helena Rasche108
- Björn Grüning78
- Nicola Soranzo59
- Bérénice Batut55
- Cristóbal Gallardo54
- Martin Čech36
- Niall Beard25
- Anthony Bretaudeau21
- William Durand21
- Nate Coraor18
- Simon Gladman18
- Gildas Le Corguillé14
- Anne Fouilloux9
- Wendi Bacon9
- Mehmet Tekman8
- Beatriz Serrano-Solano6
- Lucille Delisle6
- Melissa Burke6
- Yvan Le Bras6
- Anup Kumar5
- Alexandre Cormier4
- Armin Dadras4
- Dave Clements4
- John Chilton4
- Marius van den Beek4
- Melanie Föll4
- Andrea Bagnacani3
- Catherine Bromhead3
- Florian Heyl3
- Kaivan Kamali3
- Paulo Cilas Morais Lyra Junior3
- Simon Bray3
- Subina Mehta3
- Teresa Müller3
- Alex Ostrovsky2
- Anton Nekrutenko2
- Caterina Fuster-Barceló2
- Dave B.2
- David López2
- Delphine Lariviere2
- Erwan Corre2
- Joachim Wolff2
- Julia Jakiela2
- Katarzyna Kamieniecka2
- Laura Leroi2
- Mallory Freeberg2
- Marisa Loach2
- Michele Maroni2
- Mira Kuntz2
- Nadia Goué2
- Pavankumar Videm2
- Romane LIBOUBAN2
- Solenne Correard2
- Stéphanie Robin2
- Tomas Klingström2
- Alaa-Elghamry1
- Anika Erxleben1
- Anna Syme1
- Anne Pajon1
- Avani Khadilkar1
- Christof De Bo1
- Christopher Barnett1
- CicoZhang1
- Cécile Canlet1
- Dannon Baker1
- Ekaterina Polkh1
- Esteban Perez-Wohlfeil1
- Fabio Cumbo1
- Gianmauro Cuccuru1
- Guillaume Gricourt1
- Hans-Rudolf Hotz1
- Ioana Popescu1
- Jean Iaquinta1
- Jean-Loup Faulon1
- Jennifer Hillman-Jackson1
- Joan Hérisson1
- Junhao Qiu1
- Kenza Bazi-Kabbaj1
- Leily Rabbani1
- Maria Doyle1
- Markus Wolfien1
- Mateo Boudet1
- Matthias Bernt1
- Morgan Howells1
- Mélanie Petera1
- Olha Nahorna1
- Olivia Doppelt-Azeroual1
- Phil Reed1
- Pratik Jagtap1
- RJMW1
- Rahmot Afolabi1
- Ross Lazarus1
- Swathi Nataraj1
- Thomas Duigou1
- Valentin Marcon1
- Vlad Visan1
- Wolfgang Maier1
- Xavier Garnier1
- Youri Hoogstrate1
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- Resource type
- slides
- e-learning739
- Recorded webinar301
- Video196
- Tutorial133
- Training materials76
- Presentation66
- Webinar62
- Course materials61
- Talk53
- lessons53
- Slides51
- tutorial50
- hands-on tutorial38
- video38
- Slidedeck31
- Documentation30
- course materials29
- exercise26
- Scripts20
- Exercise18
- Handout17
- Lecture16
- Poster16
- PDF14
- Slideshow14
- E-learning9
- E-Learning8
- Jupyter notebook7
- Series of videos6
- Online material6
- Bioinformatics5
- Coding5
- FREE online course5
- online modules5
- tutorials5
- youtube video5
- examples4
- online course4
- podcast4
- Book3
- Computational Biology3
- Computer Science3
- Computer Software3
- Data Science3
- Education3
- How-to guide3
- Learning pathway3
- Life Sciences Literature Database3
- Mock data3
- Programming3
- online tutorial3
- scripts3
- slideck/ presentation3
- API reference2
- Installation instructions2
- Manual2
- Open educational resource2
- Series of videos2
- Vignette2
- case studies2
- e-Learning2
- educational materials2
- handbook2
- knowledgebase2
- presentation2
- workflow2
- Blog post1
- Carpentries style curriculum1
- E-learning + workshop1
- Educational Resource1
- Jupyter notebooks1
- Life Science Literature Database1
- Machine Learning1
- Metadata Registry1
- Notes1
- Quiz1
- R Shiny application1
- Recording1
- Tool1
- Toolkit1
- Training materials with mock data1
- Transcriptomics1
- ViralZone1
- Workshop1
- additional reading1
- didactic activities1
- hackathon1
- implementation guidelines1
- slide deck / presentation1
- slides / presentation1
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- Related resource
- Associated Training Datasets42
- Associated Workflows36
- Jupyter Notebook (with Solutions)3
- Jupyter Notebook (without Solutions)3
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- Node
- Belgium2
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- Collection
- Byte-sized RSE series3
- PHENotyping and EnviroTyping (PHENET training collection)1
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- Active6
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