Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Providers
    • Nodes
    • Spaces

TeSS makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSS in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Bottom-up proteomics3
    • Comparative transcriptomics3
    • Discovery proteomics3
    • MS-based targeted proteomics3
    • MS-based untargeted proteomics3
    • Metaproteomics3
    • Peptide identification3
    • Protein and peptide identification3
    • Proteomics3
    • Quantitative proteomics3
    • Targeted proteomics3
    • Top-down proteomics3
    • Transcriptome3
    • Transcriptomics3
    • Biodiversity1
    • Computational ecology1
    • Ecoinformatics1
    • Ecological informatics1
    • Ecology1
    • Ecosystem science1
    • Show N_FILTERS more
    • Tool
    • Biopython
    • Galaxy364
    • Bioconductor242
    • FastQC36
    • SAMtools27
    • MultiQC26
    • BWA21
    • REDCap20
    • Data Stewardship Wizard19
    • BEDTools17
    • fastp16
    • scikit-learn16
    • JBrowse15
    • SCANPY15
    • Falco14
    • Cutadapt13
    • DeepTools13
    • ggplot213
    • BLAST12
    • QUAST12
    • BUSCO11
    • RStudio11
    • STAR11
    • GEMINI10
    • Galaxy Image Analysis10
    • scikit-image10
    • taxonomy_krona_chart10
    • FreeBayes9
    • NanoPlot9
    • RDMkit9
    • Trimmomatic9
    • Bandage8
    • FASTX-Toolkit8
    • BCFtools7
    • BamTools7
    • HISAT27
    • Trim Galore7
    • msConvert7
    • seqtk7
    • Flye6
    • MAFFT6
    • MaxQuant6
    • Minimap26
    • Ontology Lookup Service6
    • Open Babel6
    • Unicycler6
    • Workflow4Metabolomics6
    • gffread6
    • BridgeDb5
    • COPASI5
    • DESeq25
    • European Nucleotide Archive (ENA)5
    • Galactic Circos5
    • MetaPhlAn5
    • MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC5
    • RSeQC5
    • SRA Software Toolkit5
    • Salmon5
    • StringTie5
    • anndata5
    • annotatemyids5
    • compute_sequence_length5
    • gffcompare5
    • kraken25
    • xcms5
    • Bowtie 24
    • Bwa-mem24
    • CellProfiler4
    • Chipster4
    • Diamond4
    • GOseq4
    • KrakenTools4
    • MACS4
    • MSstats4
    • Merqury4
    • Newick Utilities4
    • QualiMap4
    • The Protein Data Bank (PDB)4
    • UniProt4
    • bx-python4
    • mothur4
    • snpEff4
    • Apollo3
    • Bakta3
    • Bracken3
    • BridgeDbR3
    • Cardinal3
    • Clustal 1.8 (Clustal W, Clustal X)3
    • DISEASES3
    • DropletUtils3
    • FastTree3
    • GenomeScope 2.03
    • GraPhlAn3
    • InterMine3
    • InterMineR3
    • InterProScan (EBI)3
    • MGnify (was EBI Metagenomics)3
    • OMArk3
    • OMERO3
    • R3
    • Show N_FILTERS more
    • Content provider
    • GTN7
    • Show N_FILTERS more
    • Keyword
    • Proteomics3
    • Transcriptomics2
    • label-free2
    • EBV dataset1
    • EBV workflow1
    • Ecology1
    • Single Cell1
    • biodiversity1
    • community composition EBV class1
    • eDNA1
    • genetic composition EBV class1
    • metabarcoding1
    • miRNA1
    • plants1
    • proteogenomics1
    • stress tolerance1
    • Show N_FILTERS more
    • Competency level
    • Beginner6
    • Intermediate1
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International7
    • Show N_FILTERS more
    • Target audience
    • Students7
    • Show N_FILTERS more
    • Author
    • James Johnson3
    • Subina Mehta3
    • Cristóbal Gallardo2
    • Katherine Do2
    • Pavankumar Videm2
    • Beatriz Serrano-Solano1
    • Coline Royaux1
    • Eric Coissac1
    • Frédéric Boyer1
    • Mehmet Tekman1
    • Olivier Norvez1
    • Pratik Jagtap1
    • Praveen Kumar1
    • Ray Sajulga1
    • Timothy J. Griffin1
    • Yvan Le Bras1
    • Show N_FILTERS more
    • Contributor
    • Helena Rasche5
    • Saskia Hiltemann5
    • Björn Grüning3
    • Cristóbal Gallardo3
    • Beatriz Serrano-Solano2
    • Bérénice Batut2
    • Nicola Soranzo2
    • Pavankumar Videm2
    • Pratik Jagtap2
    • Subina Mehta2
    • Timothy J. Griffin2
    • Anne Fouilloux1
    • Anthony Bretaudeau1
    • James Johnson1
    • Katherine Do1
    • Lucille Delisle1
    • Marie Josse1
    • Mehmet Tekman1
    • Melanie Föll1
    • Mohua Das1
    • Morgan Howells1
    • Nate Coraor1
    • Wendi Bacon1
    • Yvan Le Bras1
    • Show N_FILTERS more
    • Resource type
    • e-learning6
    • slides1
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets7
    • Associated Workflows6
    • Show N_FILTERS more
    • Collection
    • ELIXIR Biodiversity Community1
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Hide materials with broken links
  • Show archived materials

Training materials

  • Subscribe via email

Email Subscription

Register training material

Tools: Biopython

and Include broken links: true

7 materials found
  • e-learning

    Neoantigen 1b: Non-Reference-Database-Generation

    • Beginner
    Proteomics Proteomics label-free
  • e-learning

    Neoantigen 2: Non-normal-Database-Generation

    • Beginner
    Proteomics Proteomics label-free
  • slides

    Whole transcriptome analysis of Arabidopsis thaliana

    • Beginner
    Transcriptomics Transcriptomics
  • e-learning

    Whole transcriptome analysis of Arabidopsis thaliana

    • Beginner
    Transcriptomics Transcriptomics miRNA plants stress tolerance
  • e-learning

    Proteogenomics 1: Database Creation

    •• Intermediate
    Proteomics Proteomics proteogenomics
  • e-learning

    Metabarcoding/eDNA through Obitools

    • Beginner
    Ecology Biodiversity EBV dataset EBV workflow Ecology biodiversity community composition EBV class eDNA genetic composition EBV class metabarcoding
  • e-learning

    Understanding Barcodes

    • Beginner
    Transcriptomics Single Cell
Training eSupport System
[email protected]
Contribute
About TeSS
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.