Training materials
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hands-on tutorial
Introduction to Research Data Management
• BeginnerData curation and archival Data quality management Research Data Management Research Publishing -
Pan genomics tutorial using Minima2 and seq-seq-pan
• Beginnerpan genomics genome alignment Minimap2 alignment seq-seq-pan R visualization genome alignment -
Online material, hands-on tutorial
Introduction to Docker and Singularity
• BeginnerReproducibility Container Singularity -
hands-on tutorial
Bulk RNASeq analysis
•• IntermediateDifferential gene expression profiling Transcriptomics Gene expression Expression analysis Data analysis NGS RNASeq transcriptomics -
e-learning
Basic statistics in Prism
• BeginnerStatistics and probability statistics -
e-learning
Basic statistics theory
• BeginnerStatistics and probability statistics -
slides, scripts
Bioinformatics for Proteomics
• BeginnerProteomics Proteomics -
slides, R Shiny application
Proteomics Data Analysis (PDA)
•• IntermediateProteomics proteomics quantitative proteomics -
hands-on tutorial
A tour of Machine Learning
•• IntermediateMachine learning Classification Deep Learning Machine Learning -
Slideshow, Training materials
Prediction of protein structures and complexes with AlphaFold on the HPC
•• IntermediateProtein structure analysis Machine learning Structure prediction Structure visualisation Multiple sequence alignment AlphaFold Database (13181) Structure prediction