Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Providers
    • Nodes
    • Spaces

TeSS makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSS in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • MicroRNA sequencing2
    • RNA sequencing2
    • RNA-Seq2
    • RNA-Seq analysis2
    • Small RNA sequencing2
    • Small RNA-Seq2
    • Small-Seq2
    • Transcriptome profiling2
    • WTSS2
    • Whole transcriptome shotgun sequencing2
    • miRNA-seq2
    • Bayesian methods1
    • Bioinformatics1
    • Biostatistics1
    • Comparative transcriptomics1
    • Descriptive statistics1
    • FAIR data1
    • Findable, accessible, interoperable, reusable data1
    • Gaussian processes1
    • Inferential statistics1
    • Markov processes1
    • Multivariate statistics1
    • Pipelines1
    • Probabilistic graphical model1
    • Probability1
    • Software integration1
    • Statistics1
    • Statistics and probability1
    • Tool integration1
    • Tool interoperability1
    • Transcriptome1
    • Transcriptomics1
    • Workflows1
    • Show N_FILTERS more
    • Tool
    • Bioconductor
    • Galaxy363
    • FastQC36
    • SAMtools27
    • MultiQC26
    • BWA21
    • REDCap20
    • Data Stewardship Wizard18
    • BEDTools17
    • fastp16
    • scikit-learn16
    • JBrowse15
    • SCANPY15
    • Falco14
    • Cutadapt13
    • DeepTools13
    • ggplot213
    • BLAST12
    • QUAST12
    • BUSCO11
    • RStudio11
    • STAR11
    • GEMINI10
    • Galaxy Image Analysis10
    • scikit-image10
    • taxonomy_krona_chart10
    • NanoPlot9
    • RDMkit9
    • Trimmomatic9
    • Bandage8
    • FASTX-Toolkit8
    • FreeBayes8
    • BCFtools7
    • BamTools7
    • Trim Galore7
    • msConvert7
    • seqtk7
    • Biopython6
    • Flye6
    • HISAT26
    • MAFFT6
    • MaxQuant6
    • Minimap26
    • Ontology Lookup Service6
    • Open Babel6
    • Unicycler6
    • Workflow4Metabolomics6
    • gffread6
    • BridgeDb5
    • COPASI5
    • DESeq25
    • European Nucleotide Archive (ENA)5
    • Galactic Circos5
    • MetaPhlAn5
    • MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC5
    • RSeQC5
    • SRA Software Toolkit5
    • Salmon5
    • anndata5
    • annotatemyids5
    • compute_sequence_length5
    • kraken25
    • xcms5
    • Bowtie 24
    • Bwa-mem24
    • CellProfiler4
    • Chipster4
    • Diamond4
    • GOseq4
    • KrakenTools4
    • MACS4
    • MSstats4
    • Merqury4
    • Newick Utilities4
    • QualiMap4
    • StringTie4
    • The Protein Data Bank (PDB)4
    • UniProt4
    • bx-python4
    • gffcompare4
    • mothur4
    • snpEff4
    • Apollo3
    • Bakta3
    • Bracken3
    • BridgeDbR3
    • Cardinal3
    • Clustal 1.8 (Clustal W, Clustal X)3
    • DISEASES3
    • DropletUtils3
    • FastTree3
    • GenomeScope 2.03
    • GraPhlAn3
    • InterMine3
    • InterMineR3
    • InterProScan (EBI)3
    • MGnify (was EBI Metagenomics)3
    • OMArk3
    • OMERO3
    • R3
    • Show N_FILTERS more
    • Content provider
    • Bioconductor23
    • Centre for Genomic Regulation (CRG)1
    • Show N_FILTERS more
    • Keyword
    • Intro7
    • Big data3
    • Workflows2
    • introduction2
    • BIoinformatics1
    • Data Representation1
    • GSEA1
    • Nextflow1
    • RNA-seq1
    • RStudio1
    • Transcriptomics1
    • Workshop1
    • nf-co.re1
    • Show N_FILTERS more
    • Competency level
    • Not specified23
    • Beginner1
    • Show N_FILTERS more
    • Licence
    • License Not Specified23
    • MIT License1
    • Show N_FILTERS more
    • Target audience
    • Biologists interested in learning about RNA-seq1
    • Show N_FILTERS more
    • Author
    • Martin Morgan14
    • Aaron Lun1
    • Anna Delgado Tejedor1
    • Daniel van Twisk1
    • Fabian Andrade Lozano1
    • Hervé Pagès1
    • Julia Ponomarenko1
    • Lori Shepherd1
    • Luca Cozzuto1
    • Michael Love et al.1
    • Nan Xiao1
    • Sarah Bonnin1
    • Sonali Arora1
    • Stephanie Hicks1
    • Toni Hermoso Pulido1
    • Wolfgang Huber1
    • Show N_FILTERS more
    • Contributor
    • Antonia Taiani1
    • Show N_FILTERS more
    • Resource type
    • Talk5
    • Course materials1
    • Training materials1
    • Show N_FILTERS more
    • Node
    • Spain1
    • Show N_FILTERS more
    • Status
    • Active1
    • Show N_FILTERS more
  • Show materials from all spaces
  • Hide disabled materials
  • Show materials with broken links
  • Show archived materials

Training materials

  • Subscribe via email

Email Subscription

Register training material

Tools: Bioconductor

and Include disabled: true

24 materials found
  • Lecture 19: Gene Set Enrichment Analysis

    GSEA
  • Lab 1: Introduction to R and Bioconductor

    introduction
  • Lecture 1: Introduction to R and Bioconductor

    introduction
  • 06: Gene Set Enrichment Analysis

    Intro
  • 05: Bioconductor Annotation Resources

    Intro
  • 06: Gene Set Enrichment -- Introduction

    Intro
  • 04: Practical: Organizing data with SummarizedExperiment

    Intro
  • 03: Core approaches in Bioconductor

    Intro
  • 02: Practical: R / Bioconductor and Reproducible Research

    Intro
  • 01: Introduction to R and Bioconductor

    Intro
  • 1
  • 2
  • 3
Training eSupport System
[email protected]
Contribute
About TeSS
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.