Training materials
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e-learning
Execute a BiaPy workflow in Galaxy
•• IntermediateImaging 3D image Conversion Deep learning Image annotation Image segmentation Imaging Overlay Volume rendering -
e-learning
GLEAM Image Learner - Validating Skin Lesion Classification on HAM10000
•• IntermediateStatistics and probability Deep Learning HAM10000 Dataset Image Classification Image Learner Skin Lesion Classification Statistics and machine learning -
slides
Gleam Image Learner - Validating Skin Lesion Classification on HAM10000
• BeginnerStatistics and probability Statistics and machine learning -
e-learning
Galaxy Tabular Learner - Building a Model using Chowell clinical data
•• IntermediateStatistics and probability LORIS Score Model Machine Learning Statistics and machine learning Tabular Learner -
e-learning
Building and Annotating Metagenome-Assembled Genomes (MAGs) from Short Metagenomics Paired Reads
•• IntermediateMetagenomics Microbial ecology Sequence assembly Microbiome assembly binning metagenomics microgalaxy -
e-learning
Remove contamination and host reads
• BeginnerMetagenomics Microbial ecology Microbiome host-removal metagenomics microgalaxy preprocessing -
e-learning
Hybrid genome assembly - Nanopore and Illumina
• BeginnerSequence assembly Assembly assembly denovo genomics illumina nanopore -
e-learning
OpenRefine Tutorial for researching cultural data
• BeginnerDigital Humanities -
e-learning
Nitrate DMQC for autonomous platforms such as Argo floats
• BeginnerClimate biogeochemical earth-system ocean -
e-learning
Introduction to Digital Humanities in Galaxy
• BeginnerDigital Humanities text mining