Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Providers
    • Nodes
    • Spaces

TeSS makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSS in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Exomes41
    • Genome annotation41
    • Genomes41
    • Genomics41
    • Personal genomics41
    • Synthetic genomics41
    • Viral genomics41
    • Whole genomes41
    • Comparative transcriptomics35
    • Transcriptome35
    • Transcriptomics35
    • Bayesian methods31
    • Biodiversity31
    • Biological sequences31
    • Biostatistics31
    • Descriptive statistics31
    • Gaussian processes31
    • Inferential statistics31
    • Markov processes31
    • Multivariate statistics31
    • Probabilistic graphical model31
    • Probability31
    • Sequence analysis31
    • Sequence databases31
    • Statistics31
    • Statistics and probability31
    • Assembly29
    • Sequence assembly29
    • Community analysis28
    • Environmental microbiology28
    • Microbial ecology28
    • Microbiome28
    • Molecular community analysis28
    • Bottom-up proteomics26
    • Discovery proteomics26
    • MS-based targeted proteomics26
    • MS-based untargeted proteomics26
    • Metagenomics26
    • Metaproteomics26
    • Peptide identification26
    • Protein and peptide identification26
    • Proteomics26
    • Quantitative proteomics26
    • Shotgun metagenomics26
    • Targeted proteomics26
    • Top-down proteomics26
    • Computational ecology20
    • Ecoinformatics20
    • Ecological informatics20
    • Ecology20
    • Ecosystem science20
    • Antimicrobial stewardship18
    • Diffraction experiment18
    • Imaging18
    • Medical microbiology18
    • Microbial genetics18
    • Microbial physiology18
    • Microbial surveillance18
    • Microbiological surveillance18
    • Microbiology18
    • Microscopy18
    • Microscopy imaging18
    • Molecular infection biology18
    • Molecular microbiology18
    • Optical super resolution microscopy18
    • Photonic force microscopy18
    • Photonic microscopy18
    • Taxonomy14
    • DNA variation13
    • Genetic variation13
    • Genomic variation13
    • Mutation13
    • Polymorphism13
    • Somatic mutations13
    • Epigenomics11
    • Computational chemistry8
    • De novo genome sequencing6
    • Epidemiology6
    • Exometabolomics6
    • Genome sequencing6
    • LC-MS-based metabolomics6
    • MS-based metabolomics6
    • MS-based targeted metabolomics6
    • MS-based untargeted metabolomics6
    • Mass spectrometry-based metabolomics6
    • Metabolites6
    • Metabolome6
    • Metabolomics6
    • Metabonomics6
    • NMR-based metabolomics6
    • Public health6
    • Public health and epidemiology6
    • WGS6
    • Whole genome resequencing6
    • Whole genome sequencing6
    • Communicable disease5
    • DNA metabarcoding5
    • Environmental metabarcoding5
    • Gene and protein families5
    • Gene families5
    • Show N_FILTERS more
    • Tool
    • Galaxy299
    • FastQC34
    • SAMtools25
    • MultiQC22
    • BEDTools16
    • BWA16
    • scikit-learn16
    • SCANPY15
    • JBrowse14
    • fastp14
    • DeepTools13
    • Cutadapt12
    • Falco12
    • BUSCO11
    • QUAST11
    • ggplot211
    • GEMINI10
    • Galaxy Image Analysis10
    • taxonomy_krona_chart10
    • NanoPlot9
    • STAR9
    • Trimmomatic9
    • scikit-image9
    • Bandage8
    • BCFtools7
    • BLAST7
    • FreeBayes7
    • BamTools6
    • Flye6
    • MaxQuant6
    • Open Babel6
    • Trim Galore6
    • Unicycler6
    • gffread6
    • msConvert6
    • seqtk6
    • Biopython5
    • FASTX-Toolkit5
    • Galactic Circos5
    • HISAT25
    • MAFFT5
    • MetaPhlAn5
    • Minimap25
    • MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC5
    • RSeQC5
    • anndata5
    • annotatemyids5
    • compute_sequence_length5
    • kraken25
    • Bowtie 24
    • Bwa-mem24
    • DESeq24
    • GOseq4
    • KrakenTools4
    • MACS4
    • MSstats4
    • Merqury4
    • Newick Utilities4
    • SRA Software Toolkit4
    • Salmon4
    • The Protein Data Bank (PDB)4
    • UniProt4
    • bx-python4
    • mothur4
    • Bracken3
    • Cardinal3
    • CellProfiler3
    • Clustal 1.8 (Clustal W, Clustal X)3
    • Diamond3
    • DropletUtils3
    • GenomeScope 2.03
    • GraPhlAn3
    • InterProScan (EBI)3
    • OMArk3
    • RDKit3
    • SeqCode3
    • SortMeRNA3
    • Stacks3
    • StringTie3
    • UCSC Genome Browser Utilities3
    • Vcflib3
    • export2graphlan3
    • gfastats3
    • gffcompare3
    • humann3
    • pyGenomeTracks3
    • snippy3
    • Apollo2
    • Bakta2
    • Bio3D2
    • Bowtie2
    • COMBAT-TB Workbench2
    • ChEMBL2
    • ChIPpeakAnno2
    • Circos2
    • Combine Metaphlan and HUMAnN2
    • European Nucleotide Archive (ENA)2
    • FASTQE2
    • FastTree2
    • FeatureCounts2
    • Show N_FILTERS more
    • Content provider
    • GTN305
    • Show N_FILTERS more
    • Keyword
    • biodiversity35
    • microgalaxy35
    • Single Cell31
    • Statistics and machine learning30
    • Proteomics26
    • Microbiome24
    • Genome Annotation23
    • Assembly21
    • Transcriptomics21
    • Ecology20
    • Imaging18
    • prokaryote14
    • Variant Analysis13
    • jbrowse113
    • Climate11
    • Epigenetics11
    • Image segmentation10
    • Introduction to Galaxy Analyses10
    • Sequence analysis10
    • gmod10
    • assembly9
    • DDA8
    • earth-system8
    • eukaryote8
    • plants8
    • Computational chemistry7
    • EBV dataset7
    • EBV workflow7
    • Using Galaxy and Managing your Data7
    • covid197
    • nanopore7
    • one-health7
    • paper-replication7
    • 10x6
    • MIGHTS6
    • Metabolomics6
    • Overlay6
    • data management6
    • illumina6
    • interactive-tools6
    • metabarcoding6
    • metagenomics6
    • ocean6
    • transcriptomics6
    • work-in-progress6
    • bacteria5
    • cyoa5
    • español5
    • label-TMT115
    • mouse5
    • 16S4
    • Conversion4
    • DIA4
    • Digital Humanities4
    • Multi-channel image4
    • Object feature extraction4
    • QC4
    • deutsch4
    • ecology4
    • genetic composition EBV class4
    • italiano4
    • pangeo4
    • workflows4
    • ChIP-seq3
    • Deep learning3
    • Evolution3
    • Image annotation3
    • RAD-seq3
    • Synthetic Biology3
    • Visualisation3
    • amr3
    • bulk3
    • climate3
    • collections3
    • data import3
    • epigenetics3
    • essential genes3
    • eukaryota3
    • gbif3
    • human3
    • metatranscriptomics3
    • modeling3
    • proteogenomics3
    • rna-seq3
    • species populations EBV class3
    • virology3
    • 3D image2
    • Braker32
    • Data handling2
    • Data management2
    • Data sharing2
    • Fluorescence microscopy2
    • HeLa2
    • Image thresholding2
    • Isolated object tracking2
    • Object counting2
    • ROI selection2
    • Validation2
    • Volume rendering2
    • community composition EBV class2
    • Show N_FILTERS more
    • Competency level
    • Beginner233
    • Intermediate65
    • Advanced7
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International305
    • Show N_FILTERS more
    • Target audience
    • Students304
    • Instructors1
    • Show N_FILTERS more
    • Author
    • Bérénice Batut36
    • Saskia Hiltemann22
    • Subina Mehta16
    • Anthony Bretaudeau15
    • Björn Grüning15
    • Helena Rasche15
    • Mehmet Tekman13
    • Yvan Le Bras13
    • Cristóbal Gallardo12
    • Anton Nekrutenko11
    • Maria Doyle11
    • Pavankumar Videm11
    • Pratik Jagtap11
    • Wolfgang Maier11
    • Anne Fouilloux10
    • Delphine Lariviere10
    • Marie Josse10
    • Melanie Föll10
    • Simon Bray10
    • Simon Gladman10
    • Wendi Bacon10
    • Anup Kumar9
    • Kaivan Kamali8
    • Timothy J. Griffin8
    • Anna Syme7
    • Daniel Blankenberg7
    • Diana Chiang Jurado7
    • Erwan Corre7
    • Julia Jakiela7
    • Matthias Fahrner7
    • Nicola Soranzo7
    • Paul Zierep7
    • Praveen Kumar7
    • Stéphanie Robin7
    • Alexandre Cormier6
    • Anika Erxleben6
    • Dave Clements6
    • Emma Leith6
    • Florian Christoph Sigloch6
    • Jeremy Goecks6
    • Junhao Qiu6
    • Laura Leroi6
    • Leonid Kostrykin6
    • Paulo Cilas Morais Lyra Junior6
    • Beatriz Serrano-Solano5
    • Dechen Bhuming5
    • James Johnson5
    • Joachim Wolff5
    • Katherine Do5
    • Lucille Delisle5
    • Ray Sajulga5
    • Riccardo Massei5
    • Alex Ostrovsky4
    • Alireza Khanteymoori4
    • Amirhossein Naghsh Nilchi4
    • Christopher Barnett4
    • Clemens Blank4
    • Coline Royaux4
    • Daniela Schneider4
    • Florian Heyl4
    • Katarzyna Kamieniecka4
    • Khai Van Dang4
    • Krzysztof Poterlowicz4
    • Mallory Freeberg4
    • Marius van den Beek4
    • Vivek Bhardwaj4
    • Bazante Sanders3
    • Belinda Phipson3
    • Engy Nasr3
    • Fidel Ramirez3
    • Gildas Le Corguillé3
    • Guillaume Gricourt3
    • Helge Hecht3
    • Ioana Popescu3
    • Jean-Loup Faulon3
    • Joan Hérisson3
    • Kenza Bazi-Kabbaj3
    • Khaled Jum'ah3
    • Marie Crane3
    • Marisa Loach3
    • Miguel Roncoroni3
    • Mo Heydarian3
    • Morgan Howells3
    • Nadia Goué3
    • Polina Polunina3
    • Romane LIBOUBAN3
    • Tharindu Senapathi3
    • Thomas Duigou3
    • Torsten Seemann3
    • Alyssa Pybus2
    • Anne Pajon2
    • Chao Zhang2
    • Christoph Stritt2
    • Daniela Brites2
    • David Christiany2
    • Ekaterina Polkh2
    • Elisa Michon2
    • Esteban Perez-Wohlfeil2
    • Florence Combes2
    • Friederike Dündar2
    • Show N_FILTERS more
    • Contributor
    • Saskia Hiltemann271
    • Helena Rasche224
    • Björn Grüning220
    • Bérénice Batut121
    • Nicola Soranzo68
    • Cristóbal Gallardo55
    • Niall Beard44
    • Anthony Bretaudeau42
    • Martin Čech35
    • Armin Dadras34
    • Gildas Le Corguillé32
    • Pavankumar Videm32
    • Mehmet Tekman31
    • Teresa Müller30
    • Wendi Bacon30
    • William Durand30
    • Wolfgang Maier30
    • Beatriz Serrano-Solano28
    • Melanie Föll28
    • Anup Kumar23
    • Yvan Le Bras23
    • Simon Bray21
    • Maria Doyle19
    • Leonid Kostrykin17
    • Marie Josse16
    • Subina Mehta16
    • Deepti Varshney15
    • Tristan Reynolds15
    • Paul Zierep14
    • Anne Fouilloux13
    • Julia Jakiela13
    • Lucille Delisle13
    • Nate Coraor12
    • Anton Nekrutenko11
    • Delphine Lariviere10
    • Diana Chiang Jurado10
    • Pablo Moreno10
    • Marisa Loach9
    • Simon Gladman9
    • Amirhossein Naghsh Nilchi8
    • Anna Syme8
    • David López8
    • Kaivan Kamali8
    • Matthias Bernt8
    • Mélanie Petera8
    • Stéphanie Robin8
    • Daniela Schneider7
    • Marius van den Beek7
    • Verena Moosmann7
    • Alexandre Cormier6
    • Clemens Blank6
    • Florian Heyl6
    • Hans-Rudolf Hotz6
    • Mallory Freeberg6
    • Morgan Howells6
    • Paulo Cilas Morais Lyra Junior6
    • Pratik Jagtap6
    • Alireza Khanteymoori5
    • Bert Droesbeke5
    • Christopher Barnett5
    • Florian Christoph Sigloch5
    • Peter van Heusden5
    • Timothy J. Griffin5
    • Clea Siguret4
    • Fabio Cumbo4
    • Linelle Abueg4
    • Riccardo Massei4
    • Bazante Sanders3
    • Coline Royaux3
    • Dave Clements3
    • Donny Vrins3
    • Ekaterina Polkh3
    • Engy Nasr3
    • Joachim Wolff3
    • Katarzyna Kamieniecka3
    • Khaled Jum'ah3
    • Mateo Boudet3
    • Miaomiao Zhou3
    • Natalie Whitaker-Allen3
    • Swathi Nataraj3
    • Timon Schlegel3
    • Alex Ostrovsky2
    • Anika Erxleben2
    • Carlos Chee Mendonça2
    • Christine Oger2
    • Christoph Stritt2
    • CicoZhang2
    • Enis Afgan2
    • Esteban Perez-Wohlfeil2
    • Fidel Ramirez2
    • Florence Combes2
    • Graeme Tyson2
    • Igor Makunin2
    • Jayadev Joshi2
    • Jennifer Hillman-Jackson2
    • Jonathan Kreplak2
    • Jonathan Manning2
    • Junhao Qiu2
    • Kenza Bazi-Kabbaj2
    • Laura Leroi2
    • Show N_FILTERS more
    • Resource type
    • e-learning269
    • slides36
    • Show N_FILTERS more
    • Related resource
    • Associated Workflows
    • Associated Training Datasets326
    • Jupyter Notebook (with Solutions)51
    • Jupyter Notebook (without Solutions)51
    • Input datasets32
    • Research Data Management in Life Sciences11
    • Associated slides9
    • The Carpentries7
    • Quarto/RMarkdown Notebook6
    • Proteomics dataset5
    • Sequence analysis dataset5
    • Transcriptomics dataset5
    • Assembly dataset4
    • Variant Analysis dataset4
    • Assembly slides3
    • DMPonline3
    • Data Stewardship Wizard3
    • Development in Galaxy slides3
    • Slides3
    • Workshop recording3
    • ChIP-Seq data analysis dataset2
    • DisProt2
    • Epigenetics dataset2
    • Genome Annotation dataset2
    • Metagenomics dataset2
    • Sequence analysis slides2
    • ARROWSMITH1
    • Beacon v2: a discovery tool for genomic and pheno-clinical data1
    • COBRA Toolbox1
    • CanCOGeN1
    • Contributing to the Galaxy Training Material slides1
    • DMPortal1
    • Data Visualisation (theory) 1
    • DisGeNET: a discovery platform designed to address a variety of questions concerning the genetic underpinning of human diseases1
    • EGA Submitter Portal Tutorial1
    • ELIXIR's Impact Toolkit1
    • ENA1
    • Event1
    • FAIR for busy biologists1
    • FAIR in (biological) practice1
    • GEEM1
    • GPAP: the RD-Connect Genome-Phenome Analysis Platform for diagnosis and gene discovery in rare disease research1
    • Galaxy Server administration slides1
    • Galaxy project guided tours1
    • Genome Annotation slides1
    • Genomics England PanelApp1
    • GitHub1
    • HoloFood Project1
    • Introduction to Galaxy Analyses dataset1
    • Introduction to Galaxy dataset1
    • Introduction to the EGA and sharing sensitive data1
    • MGnify1
    • MetaboLights1
    • MobiDB1
    • Next generation biobanking ontology (NGBO)1
    • OpenCloning1
    • OpenRefine1
    • Public Health Alliance for Genomic Epidemiology1
    • R basics1
    • RDMkit1
    • REPET image Docker1
    • RNA-seq data package1
    • Ready For BioData Management?1
    • Slides for Introduction to statistics with R 1
    • Slides | Beacon v2: a discovery tool for genomic and pheno-clinical data1
    • Slides | DisGeNET: a discovery platform designed to address a variety of questions concerning the genetic underpinning of human diseases1
    • Slides | GPAP: the RD-Connect Genome-Phenome Analysis Platform for diagnosis and gene discovery in rare disease research1
    • Slides | Introduction to the EGA and sharing sensitive data1
    • Statistics dataset1
    • Transcriptomics slides1
    • User Interface and Features dataset1
    • VEIS webinar: The essentials of DUO codes | Presentation1
    • VEIS webinar: The essentials of DUO codes | Video1
    • Video Walkthrough of the Poster1
    • Workshop FAIR & Data stewardship for the 2020 ITN ProEVLifeCycle1
    • Workshop FAIR & Data stewardship for the 2021 ITN ProEVLifeCycle1
    • compareMS21
    • elabFTW1
    • pydna1
    • recorded guidance on how to install a SciNote account1
    • recorded intro to hackathon1
    • recorded presentation on integration of ELNs in nanosciences1
    • seq-seq-pan1
    • Show N_FILTERS more
    • Collection
    • ELIXIR Biodiversity Community4
    • ELIXIR hCNV community - collection of courses and materials.1
    • ELIXIR Federated Human Data Community1
    • Show N_FILTERS more
  • Show materials from all spaces
  • Hide disabled materials
  • Show materials with broken links
  • Show archived materials

Training materials

  • Subscribe via email

Email Subscription

Register training material

Related resources: Associated Workflows

and Include disabled: true

305 materials found
  • e-learning

    Proteogenomics 3: Novel peptide analysis

    •• Intermediate
    Proteomics Proteomics proteogenomics
  • e-learning

    Machine Learning Modeling of Anticancer Peptides

    •• Intermediate
    Proteomics ML Proteomics cancer
  • e-learning

    Detection and quantitation of N-termini (degradomics) via N-TAILS

    •• Intermediate
    Proteomics Proteomics
  • e-learning

    MaxQuant and MSstats for the analysis of label-free data

    •• Intermediate
    Proteomics Proteomics label-free
  • e-learning

    Label-free data analysis using MaxQuant

    • Beginner
    Proteomics DDA Proteomics label-free
  • e-learning

    EncyclopeDIA

    • Beginner
    Proteomics DIA Proteomics
  • e-learning

    Peptide and Protein ID using OpenMS tools

    ••• Advanced
    Proteomics DDA HeLa Proteomics
  • e-learning

    Protein FASTA Database Handling

    • Beginner
    Proteomics DDA Proteomics
  • e-learning

    Metaproteomics tutorial

    • Beginner
    Proteomics Proteogenomics Biodiversity Taxonomy Proteomics microgalaxy
  • e-learning

    Getting your hands-on climate data

    • Beginner
    Climate
  • 1
  • 2
  • …
  • 19
  • 20
  • 21
  • 22
  • 23
  • 24
  • 25
  • 26
  • 27
  • …
  • 30
  • 31
Training eSupport System
[email protected]
Contribute
About TeSS
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.