Training materials
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Scientific topics: Genome annotation
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and Related resources: Associated Training Datasets
46 materials found
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ELIXIR TeSS
e-learning
Pangenome analysis with Roary
• BeginnerGenomics Genome Annotation pangenome phylogeny prokaryote -
ELIXIR TeSS
e-learning
Comparison of two annotation tools - Helixer and Braker3
•• IntermediateGenomics Sequence assembly Braker3 Genome Annotation Helixer biodiversity eukaryota jbrowse1 -
ELIXIR TeSS
e-learning
Genome annotation with Braker3
•• IntermediateGenomics Sequence assembly Biodiversity Zoology Plant biology Braker3 Genome Annotation biodiversity eukaryota jbrowse1 -
ELIXIR TeSS
e-learning
Phylogenetic analysis for bacterial comparative genomics
• BeginnerEvolutionary biology Genomics Microbiology Phylogeny Evolution microgalaxy work-in-progress -
ELIXIR TeSS
e-learning
Bacterial genome quality control
• BeginnerGenomics Microbiology Genome Annotation microgalaxy work-in-progress -
ELIXIR TeSS
e-learning
Bacterial pangenomics
• BeginnerGenomics Microbiology Genome Annotation -
ELIXIR TeSS
e-learning
Dataset construction for bacterial comparative genomics
• BeginnerGenomics Microbiology Genome Annotation microgalaxy work-in-progress -
ELIXIR TeSS
e-learning
Query an annotated mobile genetic element database to identify and annotate genetic elements (e.g. plasmids) in metagenomics data
• BeginnerMetagenomics Microbial ecology Genomics Microbiology Sequence analysis Mobile genetic elements Microbiome -
ELIXIR TeSS
e-learning
Decontamination of a genome assembly
• BeginnerSequence assembly Genomics Biodiversity Assembly biodiversity -
ELIXIR TeSS
e-learning
Assembly of the mitochondrial genome from PacBio HiFi reads
• BeginnerSequence assembly Genomics Biodiversity Mitochondria Assembly biodiversity