Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Providers
    • Nodes
    • Spaces

TeSS makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSS in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Transcriptomics
    • Comparative transcriptomics3
    • Transcriptome3
    • Show N_FILTERS more
    • Tool
    • anndata
    • Galaxy37
    • MultiQC8
    • FastQC7
    • STAR7
    • SAMtools6
    • DESeq25
    • RSeQC5
    • Salmon5
    • ggplot25
    • GOseq4
    • HISAT24
    • SCANPY4
    • BEDTools3
    • Biopython3
    • Cutadapt3
    • Falco3
    • Trim Galore3
    • DeepTools2
    • DropletUtils2
    • FeatureCounts2
    • Heinz2
    • IsoformSwitchAnalyzeR2
    • PfamScan2
    • R2
    • StringTie2
    • Targetfinder.org2
    • Trimmomatic2
    • UMI-tools2
    • annotatemyids2
    • fastp2
    • gffcompare2
    • gffread2
    • miRDeep22
    • pyGenomeTracks2
    • rnaQUAST2
    • Alevin1
    • BioContainers1
    • Bioconductor1
    • ChiRA1
    • DESeq1
    • EGSEA1
    • Enrichr1
    • GOEnrichment1
    • GSEA1
    • MEME1
    • MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC1
    • Nextflow1
    • Peakachu1
    • QualiMap1
    • RCAS1
    • RStudio1
    • SRA Software Toolkit1
    • Subread1
    • Trinity1
    • UCSC Genome Browser1
    • biomaRt1
    • blockbuster1
    • fgsea1
    • limma1
    • nf-core-rnaseq1
    • pathview1
    • Show N_FILTERS more
    • Content provider
    • GTN3
    • Show N_FILTERS more
    • Keyword
    • MIGHTS3
    • Single Cell3
    • paper-replication3
    • Show N_FILTERS more
    • Competency level
    • Beginner3
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International3
    • Show N_FILTERS more
    • Target audience
    • Students3
    • Show N_FILTERS more
    • Author
    • Wendi Bacon3
    • Jonathan Manning1
    • Show N_FILTERS more
    • Contributor
    • Björn Grüning3
    • Helena Rasche3
    • Julia Jakiela3
    • Marisa Loach3
    • Mehmet Tekman3
    • Pavankumar Videm3
    • Saskia Hiltemann3
    • Wendi Bacon3
    • David López2
    • Jonathan Manning2
    • Pablo Moreno2
    • Amirhossein Naghsh Nilchi1
    • Beatriz Serrano-Solano1
    • Bérénice Batut1
    • Martin Čech1
    • Matthias Bernt1
    • Teresa Müller1
    • Show N_FILTERS more
    • Resource type
    • e-learning3
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets3
    • Associated Workflows3
    • Show N_FILTERS more
  • Show materials from all spaces
  • Hide disabled materials
  • Show materials with broken links
  • Show archived materials

Training materials

  • Subscribe via email

Email Subscription

Register training material

Scientific topics: Transcriptomics

and Tools: anndata

and Include disabled: true

3 materials found
  • e-learning

    Combining single cell datasets after pre-processing

    • Beginner
    Transcriptomics MIGHTS Single Cell paper-replication
  • e-learning

    Generating a single cell matrix using Alevin

    • Beginner
    Transcriptomics MIGHTS Single Cell paper-replication
  • e-learning

    Filter, plot and explore single-cell RNA-seq data with Scanpy

    • Beginner
    Transcriptomics MIGHTS Single Cell paper-replication
Training eSupport System
[email protected]
Contribute
About TeSS
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.