Training materials
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e-learning
MGnify v5.0 Amplicon Pipeline
• BeginnerMetagenomics Microbial ecology Taxonomy Sequence analysis Microbiome amplicon microbiome taxonomic abundance taxonomy -
e-learning
Taxonomic Analysis of eDNA
• BeginnerEcology Biodiversity Ecology biodiversity metabarcoding -
e-learning
Genome-wide alternative splicing analysis
••• AdvancedTranscriptomics Transcriptomics alternative splicing isoform switching -
e-learning
Identification of the micro-organisms in a beer using Nanopore sequencing
• BeginnerMetagenomics Microbial ecology Taxonomy Sequence analysis Microbiome beer citizen science metagenomics microgalaxy nanopore -
e-learning
Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition
• BeginnerMetagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis … -
e-learning
16S Microbial analysis with Nanopore data
• BeginnerMetagenomics Microbial ecology Taxonomy Sequence analysis Metabarcoding 16S Microbiome metabarcoding microgalaxy nanopore … -
e-learning
Very Short Introductions: QC
• BeginnerIntroduction to Galaxy Analyses -
slides
Identification of non-canonical ORFs and their potential biological function
• BeginnerTranscriptomics Transcriptomics -
e-learning
Pox virus genome analysis from tiled-amplicon sequencing data
••• AdvancedGenetic variation Variant Analysis one-health virology -
e-learning
Large genome assembly and polishing
• BeginnerSequence assembly Genomics Biodiversity Assembly assembly biodiversity nanopore plants polishing
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