Training materials
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ELIXIR TeSS
e-learning
Unicycler assembly of SARS-CoV-2 genome with preprocessing to remove human genome reads
•• IntermediateSequence assembly Assembly biodiversity covid19 -
ELIXIR TeSS
e-learning
Vertebrate genome assembly using HiFi, Bionano and Hi-C data - Step by Step
•• IntermediateSequence assembly Genomics Biodiversity Assembly VGP biodiversity eukaryote pacbio -
ELIXIR TeSS
e-learning
Using the VGP workflows to assemble a vertebrate genome with HiFi and Hi-C data
•• IntermediateSequence assembly Chromosome conformation capture Assembly VGP biodiversity eukaryote pacbio -
ELIXIR TeSS
e-learning
Unicycler Assembly
• BeginnerSequence assembly Genomics Microbiology Assembly biodiversity microgalaxy prokaryote -
ELIXIR TeSS
e-learning
RAD-Seq de-novo data analysis
• BeginnerEcology Biodiversity EBV dataset EBV workflow Ecology RAD-seq biodiversity genetic composition EBV class species populations EBV class -
ELIXIR TeSS
e-learning
Biodiversity data exploration
• BeginnerEcology Biodiversity Ecology biodiversity data quality taxonomic data -
ELIXIR TeSS
e-learning
Compute and analyze biodiversity metrics with PAMPA toolsuite
• BeginnerEcology Biodiversity EBV dataset EBV workflow Ecology biodiversity community composition EBV class modeling species population EBV class -
ELIXIR TeSS
e-learning
Metabarcoding/eDNA through Obitools
• BeginnerEcology Biodiversity EBV dataset EBV workflow Ecology biodiversity community composition EBV class eDNA genetic composition EBV class metabarcoding -
ELIXIR TeSS
e-learning
Regional GAM
• BeginnerEcology Biodiversity EBV dataset EBV workflow Ecology biodiversity species populations EBV class species traits EBV class -
ELIXIR TeSS
e-learning
RAD-Seq to construct genetic maps
• BeginnerEcology Biodiversity EBV dataset EBV workflowz Ecology RAD-seq biodiversity genetic composition EBV class