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Scientific topics: Protein function prediction
and Tools: Combine Metaphlan and HUMAnN
and Keywords: metatranscriptomics
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Scientific topic
- Protein function prediction
- Biological sequences1
- Community analysis1
- Environmental microbiology1
- Function analysis1
- Functional analysis1
- Metagenomics1
- Metatranscriptomics1
- Microbial ecology1
- Microbiome1
- Molecular community analysis1
- Protein function analysis1
- Sequence analysis1
- Sequence databases1
- Shotgun metagenomics1
- Taxonomy1
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Tool
- Combine Metaphlan and HUMAnN
- Cutadapt2
- FastQC2
- Galaxy2
- GraPhlAn2
- MetaPhlAn2
- MultiQC2
- SortMeRNA2
- export2graphlan2
- humann2
- taxonomy_krona_chart2
- HUMAnN21
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Content provider
- GTN1
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Keyword
- metatranscriptomics
- Microbiome1
- microgalaxy1
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Competency level
- Beginner1
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Licence
- Creative Commons Attribution 4.0 International1
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Target audience
- Students1
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Author
- Bérénice Batut1
- Emma Leith1
- Pratik Jagtap1
- Praveen Kumar1
- Ray Sajulga1
- Saskia Hiltemann1
- Subina Mehta1
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Contributor
- Björn Grüning1
- Bérénice Batut1
- Christine Oger1
- Engy Nasr1
- Helena Rasche1
- Paul Zierep1
- Saskia Hiltemann1
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Resource type
- e-learning1
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- Associated Training Datasets1
- Associated Workflows1
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