Training materials
- 1
- 2
- Home
- Materials
Filter
Sort
-
-
Filter Clear filters
-
-
Scientific topic
- Genomics
- Assembly25
- Sequence assembly25
- Exomes11
- Genome annotation11
- Genomes11
- Personal genomics11
- Synthetic genomics11
- Viral genomics11
- Whole genomes11
- Biodiversity7
- Antimicrobial stewardship4
- Medical microbiology4
- Microbial genetics4
- Microbial physiology4
- Microbial surveillance4
- Microbiological surveillance4
- Microbiology4
- Molecular infection biology4
- Molecular microbiology4
- De novo genome sequencing2
- Epidemiology2
- Genome sequencing2
- Public health2
- Public health and epidemiology2
- WGS2
- Whole genome resequencing2
- Whole genome sequencing2
- 3C technologies1
- 3C-based methods1
- AMR1
- Antibiotic resistance (ABR)1
- Antifungal resistance1
- Antimicrobial resistance1
- Antiprotozoal resistance1
- Antiviral resistance1
- Bioinformatics1
- Chromatin accessibility1
- Chromatin accessibility assay1
- Chromosome conformation analysis1
- Chromosome conformation capture1
- Comparative genomics1
- Data clean-up1
- Data cleaning1
- Data integrity1
- Data quality1
- Data quality management1
- Extensive drug resistance (XDR)1
- Mitochondria1
- Multidrug resistance1
- Multiple drug resistance (MDR)1
- Multiresistance1
- Pandrug resistance (PDR)1
- Total drug resistance (TDR)1
- Show N_FILTERS more
-
-
-
Tool
- Galaxy10
- QUAST5
- BUSCO4
- Bandage4
- Bwa-mem23
- Flye3
- GenomeScope 2.03
- Minimap23
- gfastats3
- BEDTools2
- FastQC2
- Merqury2
- NanoPlot2
- fastp2
- BLAST1
- Circos1
- Cutadapt1
- Diamond1
- Falco1
- Filtlong1
- Galactic Circos1
- Medaka1
- MultiQC1
- Polypolish1
- Racon1
- SALSA1
- SAMtools1
- Smudgeplots1
- Unicycler1
- compute_sequence_length1
- kraken21
- purge_dups1
- shovill1
- Show N_FILTERS more
-
-
-
Content provider
- GTN10
- ELIXIR Norway1
- Show N_FILTERS more
-
-
-
Keyword
- Assembly
- Genomics125
- Next generation sequencing46
- Genome Annotation30
- Variant analysis26
- Genome assembly20
- RNA-seq20
- microgalaxy20
- R17
- Transcriptomics17
- biodiversity16
- Long read sequencing14
- prokaryote14
- jbrowse113
- Genome annotation12
- Unix/Linux12
- gmod11
- Comparative genomics10
- General9
- eukaryote9
- Data visualization8
- Epigenetics7
- Metagenomics7
- High performance computing6
- Population genetics6
- Single-cell sequencing6
- ATAC-seq5
- Data management5
- Galaxy5
- Statistics5
- assembly5
- bacteria5
- illumina5
- work-in-progress5
- ChIP-seq4
- Cloud computing4
- EeLP4
- Epidemiology4
- Quality Control4
- Version control4
- eLearning4
- one-health4
- Assembly Evaluation3
- Database Management3
- Evolution3
- FAIR data3
- Machine learning3
- Multiomics3
- Python3
- Reproducibility3
- Variant Analysis3
- apollo23
- bioinformatics3
- essential genes3
- eukaryota3
- plants3
- Annotation2
- Artificial intelligence2
- Braker32
- Command line2
- Data analysis2
- FEGA2
- Federated EGA2
- Functional Genomics2
- HPC2
- Microbiology2
- Pathways and Networks2
- Phylogenetics / Phylogenomics2
- Shell2
- amr2
- evolution2
- genomics2
- maker2
- nanopore2
- pacbio2
- tnseq2
- transcriptomics2
- RNA-Seq1
- API1
- Amazon Web Services1
- Assembly Curation1
- Biocuration1
- Bioinformatics1
- BridgeDb1
- CRISPR1
- CWL1
- ChIP-Seq1
- Conservation genomics1
- Containerization1
- Data Analysis1
- Data Life Cycle1
- Data Management Plan1
- Data Steward1
- Data Stewardship Wizard1
- Data management planning1
- Data science1
- Data sharing1
- Data submission1
- Designing functional genomics experiments1
- Docker1
- Show N_FILTERS more
-
-
-
Competency level
- Beginner8
- Intermediate2
- Not specified1
- Show N_FILTERS more
-
-
-
Target audience
- Students10
- Bioinformatician1
- Show N_FILTERS more
-
-
-
Author
- Delphine Lariviere6
- Anton Nekrutenko3
- Anna Syme2
- Bazante Sanders2
- Bérénice Batut2
- Cristóbal Gallardo2
- Alex Ostrovsky1
- Alexandre Cormier1
- Anthony Bretaudeau1
- Brandon Pickett1
- Erwan Corre1
- Fabian Recktenwald1
- Giulio Formenti1
- Helena Rasche1
- Laura Leroi1
- Linelle Abueg1
- Marcella Sozzoni1
- Simon Gladman1
- Solenne Correard1
- Stéphanie Robin1
- Tom Brown1
- Show N_FILTERS more
-
-
-
Contributor
- Bérénice Batut10
- Saskia Hiltemann10
- Björn Grüning9
- Helena Rasche7
- Cristóbal Gallardo6
- Anthony Bretaudeau5
- Deepti Varshney4
- Delphine Lariviere4
- Anton Nekrutenko3
- Teresa Müller3
- Anna Syme2
- Bazante Sanders2
- Miaomiao Zhou2
- Niall Beard2
- Nicola Soranzo2
- Solenne Correard2
- Tristan Reynolds2
- Enis Afgan1
- Gildas Le Corguillé1
- Linelle Abueg1
- Maria Doyle1
- Marius van den Beek1
- Matúš Kalaš1
- Nate Coraor1
- Paul Zierep1
- Saim Momin1
- Stéphanie Robin1
- Tom Brown1
- Verena Moosmann1
- William Durand1
- Wolfgang Maier1
- pimarin1
- Show N_FILTERS more
-
-
-
Resource type
- e-learning10
- Scripts1
- Slides1
- Tutorial1
- Show N_FILTERS more
-
-
-
Related resource
- Associated Workflows10
- Associated Training Datasets8
- Show N_FILTERS more
-
-
-
Status
- Active1
- Show N_FILTERS more
-
- Show materials from all spaces
- Show disabled materials
- Show materials with broken links
- Show archived materials