Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • Spaces
  • Events
  • Materials
  • Workflows
  • Collections
  • e-Learning
  • Learning paths
  • Directory
    • Providers
    • Nodes

TeSSHub makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSSHub in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Biodiversity14
    • Computational ecology14
    • Ecoinformatics14
    • Ecological informatics14
    • Ecology14
    • Ecosystem science14
    • Antimicrobial stewardship1
    • Community analysis1
    • De novo genome sequencing1
    • Environmental microbiology1
    • Exomes1
    • Genome annotation1
    • Genome sequencing1
    • Genomes1
    • Genomics1
    • Medical microbiology1
    • Microbial ecology1
    • Microbial genetics1
    • Microbial physiology1
    • Microbial surveillance1
    • Microbiological surveillance1
    • Microbiology1
    • Microbiome1
    • Molecular community analysis1
    • Molecular infection biology1
    • Molecular microbiology1
    • Personal genomics1
    • Synthetic genomics1
    • Viral genomics1
    • WGS1
    • Whole genome resequencing1
    • Whole genome sequencing1
    • Whole genomes1
    • Show N_FILTERS more
    • Tool
    • Galaxy14
    • Stacks3
    • BLAST2
    • BWA1
    • Biopython1
    • Bracken1
    • Clustal 1.8 (Clustal W, Clustal X)1
    • FASTX-Toolkit1
    • FastQC1
    • GEMINI1
    • OBITools1
    • Proteinortho1
    • Recentrifuge1
    • RepeatMasker1
    • fastp1
    • funannotate1
    • Show N_FILTERS more
    • Content provider
    • GTN14
    • Show N_FILTERS more
    • Keyword
    • Ecology
    • microgalaxy38
    • Single Cell34
    • Statistics and machine learning33
    • biodiversity31
    • Genome Annotation29
    • Proteomics29
    • Transcriptomics27
    • Microbiome25
    • Assembly20
    • jbrowse116
    • prokaryote16
    • Imaging14
    • gmod14
    • Variant Analysis13
    • Epigenetics11
    • Sequence analysis11
    • paper-replication11
    • work-in-progress11
    • MIGHTS10
    • Metabolomics10
    • eukaryote10
    • metabolomics10
    • Climate9
    • Foundations of Data Science9
    • Introduction to Galaxy Analyses9
    • cyoa9
    • interactive-tools9
    • jupyter-notebook9
    • plants9
    • 10x8
    • Image segmentation8
    • label-free8
    • Computational chemistry7
    • assembly7
    • metagenomics7
    • nanopore7
    • DDA6
    • EBV dataset6
    • Using Galaxy and Managing your Data6
    • Visualisation6
    • español6
    • illumina6
    • metabarcoding6
    • transcriptomics6
    • Digital Humanities5
    • EBV workflow5
    • Overlay5
    • bacteria5
    • covid195
    • deutsch5
    • italiano5
    • label-TMT115
    • one-health5
    • 16S4
    • DIA4
    • Evolution4
    • collections4
    • deconvolution4
    • ecology4
    • exposomics4
    • galaxy-intro4
    • gc-ms4
    • genetic composition EBV class4
    • lc-ms4
    • mouse4
    • single-cell4
    • ChIP-seq3
    • Conversion3
    • Deep learning3
    • Image annotation3
    • QC3
    • RAD-seq3
    • amr3
    • climate3
    • data management3
    • epigenetics3
    • essential genes3
    • eukaryota3
    • imaging3
    • mass spectrometry imaging3
    • metatranscriptomics3
    • pangeo3
    • proteogenomics3
    • rmarkdown-notebook3
    • 3D image2
    • Braker32
    • Data handling2
    • Data management2
    • Data sharing2
    • EML2
    • FAIR2
    • Fluorescence microscopy2
    • HeLa2
    • Image thresholding2
    • Isolated object tracking2
    • Multi-channel image2
    • Object counting2
    • Object feature extraction2
    • Synthetic Biology2
    • Show N_FILTERS more
    • Competency level
    • Beginner14
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International14
    • Show N_FILTERS more
    • Target audience
    • Students14
    • Show N_FILTERS more
    • Author
    • Yvan Le Bras10
    • Coline Royaux3
    • Bérénice Batut2
    • Olivier Norvez2
    • Brigida Gallone1
    • Clara Urfer1
    • Dominique Pelletier1
    • Elisa Michon1
    • Elouan Le Mestric1
    • Eric Coissac1
    • Frédéric Boyer1
    • Glinez Thibaud1
    • Jean-Baptiste Mihoub1
    • John Beliveau1
    • Marie Josse1
    • Miguel Roncoroni1
    • Simon Benateau1
    • Soumya Jha1
    • Tanguy Genthon1
    • Show N_FILTERS more
    • Contributor
    • Saskia Hiltemann14
    • Helena Rasche12
    • Yvan Le Bras11
    • Marie Josse10
    • Björn Grüning7
    • Bérénice Batut4
    • Coline Royaux3
    • Gildas Le Corguillé3
    • Niall Beard3
    • Nicola Soranzo3
    • William Durand3
    • Verena Moosmann2
    • Wolfgang Maier2
    • Anne Fouilloux1
    • Clea Siguret1
    • Cristóbal Gallardo1
    • Glinez Thibaud1
    • John Beliveau1
    • Miguel Roncoroni1
    • Tristan Reynolds1
    • Show N_FILTERS more
    • Resource type
    • e-learning14
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets
    • Associated Workflows20
    • Show N_FILTERS more
    • Collection
    • ELIXIR Biodiversity Community2
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Show materials with broken links
  • Show archived materials

Training materials

  • Subscribe via email
  • Harvest using OAI-PMH

Email Subscription

Harvest using OAI-PMH

Exchange content using OAI-PMH

Use an OAI-PMH compatible tool to harvest metadata using the OAI-PMH endpoint. In particular, this endpoint can be used for exchanging content between different TeSS instances. See the TeSS documentation for more details.

Keywords: Ecology

and Related resources: Associated Training Datasets

14 materials found
  • ELIXIR TeSS

    e-learning

    Compute and analyze biodiversity metrics with PAMPA toolsuite

    • Beginner
    Ecology Biodiversity EBV dataset EBV workflow Ecology biodiversity community composition EBV class modeling species population EBV class
  • ELIXIR TeSS

    e-learning

    Regional GAM

    • Beginner
    Ecology Biodiversity EBV dataset EBV workflow Ecology biodiversity species populations EBV class species traits EBV class
  • ELIXIR TeSS

    e-learning

    RAD-Seq to construct genetic maps

    • Beginner
    Ecology Biodiversity EBV dataset EBV workflowz Ecology RAD-seq biodiversity genetic composition EBV class
  • ELIXIR TeSS

    e-learning

    RAD-Seq Reference-based data analysis

    • Beginner
    Ecology Biodiversity EBV dataset EBV workflow Ecology RAD-seq biodiversity genetic composition EBV class species population EBV class
  • 1
  • 2
Training eSupport System
[email protected]
Contribute
About TeSSHub
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSSHub has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.