Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Providers
    • Nodes
    • Spaces

TeSS makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSS in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Transcriptomics
    • Comparative transcriptomics4
    • Transcriptome4
    • Bioinformatics1
    • FAIR data1
    • Findable, accessible, interoperable, reusable data1
    • MicroRNA sequencing1
    • Pipelines1
    • RNA sequencing1
    • RNA-Seq1
    • RNA-Seq analysis1
    • Small RNA sequencing1
    • Small RNA-Seq1
    • Small-Seq1
    • Software integration1
    • Tool integration1
    • Tool interoperability1
    • Transcriptome profiling1
    • WTSS1
    • Whole transcriptome shotgun sequencing1
    • Workflows1
    • miRNA-seq1
    • Show N_FILTERS more
    • Tool
    • Salmon
    • Galaxy23
    • MultiQC7
    • FastQC6
    • RSeQC5
    • DESeq24
    • GOseq4
    • HISAT24
    • SAMtools4
    • STAR4
    • ggplot24
    • BEDTools3
    • Cutadapt3
    • Falco3
    • Trim Galore3
    • Biopython2
    • DeepTools2
    • FeatureCounts2
    • Heinz2
    • IsoformSwitchAnalyzeR2
    • PfamScan2
    • R2
    • StringTie2
    • Targetfinder.org2
    • Trimmomatic2
    • annotatemyids2
    • fastp2
    • gffcompare2
    • gffread2
    • miRDeep22
    • pyGenomeTracks2
    • rnaQUAST2
    • BioContainers1
    • Bioconductor1
    • ChiRA1
    • DESeq1
    • EGSEA1
    • Enrichr1
    • GOEnrichment1
    • GSEA1
    • MEME1
    • Nextflow1
    • Peakachu1
    • QualiMap1
    • RCAS1
    • RStudio1
    • SRA Software Toolkit1
    • Subread1
    • Trinity1
    • UCSC Genome Browser1
    • UMI-tools1
    • biomaRt1
    • blockbuster1
    • fgsea1
    • limma1
    • nf-core-rnaseq1
    • pathview1
    • Show N_FILTERS more
    • Content provider
    • GTN3
    • Centre for Genomic Regulation (CRG)1
    • Show N_FILTERS more
    • Keyword
    • Transcriptomics
    • BIoinformatics1
    • MIGHTS1
    • Nextflow1
    • RNA-seq1
    • RStudio1
    • Single Cell1
    • Workflows1
    • miRNA1
    • nf-co.re1
    • paper-replication1
    • plants1
    • stress tolerance1
    • Show N_FILTERS more
    • Competency level
    • Beginner4
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International3
    • MIT License1
    • Show N_FILTERS more
    • Target audience
    • Students3
    • Biologists interested in learning about RNA-seq1
    • Show N_FILTERS more
    • Author
    • Cristóbal Gallardo2
    • Pavankumar Videm2
    • Anna Delgado Tejedor1
    • Beatriz Serrano-Solano1
    • Fabian Andrade Lozano1
    • Julia Ponomarenko1
    • Luca Cozzuto1
    • Mallory Freeberg1
    • Sarah Bonnin1
    • Toni Hermoso Pulido1
    • Show N_FILTERS more
    • Contributor
    • Helena Rasche3
    • Beatriz Serrano-Solano2
    • Björn Grüning2
    • Bérénice Batut2
    • Cristóbal Gallardo2
    • Pavankumar Videm2
    • Saskia Hiltemann2
    • Antonia Taiani1
    • Gildas Le Corguillé1
    • Mallory Freeberg1
    • Marius van den Beek1
    • Nate Coraor1
    • Niall Beard1
    • Nicola Soranzo1
    • William Durand1
    • Show N_FILTERS more
    • Resource type
    • e-learning2
    • Course materials1
    • Training materials1
    • slides1
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets3
    • Associated Workflows3
    • Show N_FILTERS more
    • Node
    • Spain1
    • Show N_FILTERS more
    • Status
    • Active1
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Show materials with broken links
  • Show archived materials

Training materials

  • Subscribe via email

Email Subscription

Register training material

Tools: Salmon

and Keywords: Transcriptomics

and Scientific topics: Transcriptomics

4 materials found
  • Training materials, Course materials

    RNA-seq Bioinformatics Course

    ELIXIR node event
    • Beginner
    RNA-Seq Transcriptomics Bioinformatics FAIR data Workflows RNA-seq BIoinformatics Transcriptomics nf-co.re Nextflow …
  • slides

    Whole transcriptome analysis of Arabidopsis thaliana

    • Beginner
    Transcriptomics Transcriptomics
  • e-learning

    Whole transcriptome analysis of Arabidopsis thaliana

    • Beginner
    Transcriptomics Transcriptomics miRNA plants stress tolerance
  • e-learning

    Differential abundance testing of small RNAs

    • Beginner
    Transcriptomics Transcriptomics
Training eSupport System
[email protected]
Contribute
About TeSS
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.