Training materials
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e-learning
Comparison of two annotation tools - Helixer and Braker3
•• IntermediateGenomics Sequence assembly Braker3 Genome Annotation Helixer biodiversity eukaryota jbrowse1 -
e-learning
Phylodiversity analysis quick tutorial
• BeginnerEcology Biodiversity Ecology biodiversity ecology phylodiversity taxonomic data -
e-learning
Taxonomic Analysis of eDNA
• BeginnerEcology Biodiversity Ecology biodiversity metabarcoding -
e-learning
Genome annotation with Braker3
•• IntermediateGenomics Sequence assembly Biodiversity Zoology Plant biology Braker3 Genome Annotation biodiversity eukaryota jbrowse1 -
e-learning
Decontamination of a genome assembly
• BeginnerSequence assembly Genomics Biodiversity Assembly biodiversity -
e-learning
Assembly of the mitochondrial genome from PacBio HiFi reads
• BeginnerSequence assembly Genomics Biodiversity Mitochondria Assembly biodiversity -
e-learning
Genome annotation with Helixer
•• IntermediateGenomics Biodiversity Zoology Plant biology Genome Annotation biodiversity eukaryota helixer jbrowse1 -
e-learning
Creating FAIR Quality assessment reports and draft of Data Papers from EML metadata with MetaShRIMPS
• BeginnerEcology Biodiversity EML Ecology FAIR biodiversity data paper metadata -
e-learning
Creating metadata using Ecological Metadata Language (EML) standard with EML Assembly Line functionalities
• BeginnerEcology Biodiversity EML Ecology FAIR biodiversity data paper ecology metadata -
e-learning
Large genome assembly and polishing
• BeginnerSequence assembly Genomics Biodiversity Assembly assembly biodiversity nanopore plants polishing