Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • Spaces
  • Events
  • Materials
  • Workflows
  • Collections
  • e-Learning
  • Learning paths
  • Directory
    • Providers
    • Nodes

TeSSHub makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSSHub in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Comparative transcriptomics2
    • Transcriptome2
    • Transcriptomics2
    • Algorithms1
    • Assembly1
    • Biological sequences1
    • Community analysis1
    • Computer programming1
    • DNA variation1
    • Data structures1
    • Disease1
    • Environmental microbiology1
    • Epidemiology1
    • Exomes1
    • Genetic variation1
    • Genome annotation1
    • Genomes1
    • Genomic variation1
    • Genomics1
    • Metagenomics1
    • Microbial ecology1
    • Microbiome1
    • Molecular community analysis1
    • Mutation1
    • Pathology1
    • Personal genomics1
    • Polymorphism1
    • Programming languages1
    • Public health1
    • Public health and epidemiology1
    • Sequence analysis1
    • Sequence assembly1
    • Sequence databases1
    • Shotgun metagenomics1
    • Software development1
    • Software engineering1
    • Somatic mutations1
    • Synthetic genomics1
    • Taxonomy1
    • Viral genomics1
    • Whole genomes1
    • Show N_FILTERS more
    • Tool
    • Galaxy
    • BCFtools2
    • FastQC2
    • FeatureCounts2
    • GOseq2
    • MultiQC2
    • RSeQC2
    • ggplot22
    • ABRicate1
    • Apollo1
    • BEDTools1
    • BamTools1
    • Bandage1
    • Clair31
    • Clustal 2 (Clustal W, Clustal X)1
    • Cutadapt1
    • DESeq21
    • EGA1
    • Falco1
    • FastTree1
    • Flye1
    • GEMINI1
    • HISAT21
    • JBrowse1
    • KrakenTools1
    • MLST1
    • Medaka1
    • Minimap21
    • NanoPlot1
    • Newick Utilities1
    • R1
    • RStudio1
    • SAMtools1
    • SRA Software Toolkit1
    • annotatemyids1
    • fastp1
    • kraken21
    • limma1
    • pathview1
    • taxonomy_krona_chart1
    • Show N_FILTERS more
    • Content provider
    • GTN6
    • Show N_FILTERS more
    • Keyword
    • cyoa
    • biodiversity46
    • microgalaxy39
    • Statistics and machine learning34
    • Proteomics33
    • Single Cell32
    • Ecology29
    • Genome Annotation28
    • Microbiome25
    • Transcriptomics23
    • Assembly22
    • Imaging20
    • Variant Analysis17
    • jbrowse116
    • Climate15
    • Using Galaxy and Managing your Data15
    • interactive-tools15
    • prokaryote15
    • gmod14
    • Sequence analysis12
    • Epigenetics11
    • covid1911
    • earth-system11
    • Image segmentation10
    • Introduction to Galaxy Analyses10
    • Metabolomics10
    • assembly10
    • eukaryote10
    • metabolomics10
    • work-in-progress10
    • label-free9
    • one-health9
    • plants9
    • 10x8
    • DDA8
    • ocean8
    • Computational chemistry7
    • EBV dataset7
    • EBV workflow7
    • metagenomics7
    • nanopore7
    • paper-replication7
    • Foundations of Data Science6
    • MIGHTS6
    • Overlay6
    • Visualisation6
    • data management6
    • ecology6
    • español6
    • illumina6
    • metabarcoding6
    • transcriptomics6
    • workflows6
    • Digital Humanities5
    • bacteria5
    • deconvolution5
    • deutsch5
    • italiano5
    • label-TMT115
    • mouse5
    • virology5
    • 16S4
    • Conversion4
    • DIA4
    • Evolution4
    • FAIR4
    • Multi-channel image4
    • Object feature extraction4
    • QC4
    • collections4
    • exposomics4
    • galaxy-intro4
    • gc-ms4
    • genetic composition EBV class4
    • lc-ms4
    • pangeo4
    • single-cell4
    • ChIP-seq3
    • Deep learning3
    • Image annotation3
    • RAD-seq3
    • amr3
    • bulk3
    • climate3
    • computational-chemistry3
    • data import3
    • deep-learning3
    • epigenetics3
    • essential genes3
    • eukaryota3
    • gbif3
    • human3
    • imaging3
    • mass spectrometry imaging3
    • metatranscriptomics3
    • modeling3
    • pacbio3
    • proteogenomics3
    • rna-seq3
    • sc_formats3
    • Show N_FILTERS more
    • Competency level
    • Beginner3
    • Intermediate2
    • Advanced1
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International6
    • Show N_FILTERS more
    • Target audience
    • Students6
    • Show N_FILTERS more
    • Author
    • Saskia Hiltemann3
    • Bérénice Batut2
    • Helena Rasche2
    • Anika Erxleben1
    • Anthony Bretaudeau1
    • Clemens Blank1
    • Engy Nasr1
    • Iacopo Cristoferi1
    • Jasper Ouwerkerk1
    • Lucille Delisle1
    • Mallory Freeberg1
    • Marek Ostaszewski1
    • Maria Doyle1
    • Matti Hoch1
    • Mo Heydarian1
    • Myrthe van Baardwijk1
    • Nicola Soranzo1
    • Paul Zierep1
    • Pavankumar Videm1
    • Peter van Heusden1
    • Wolfgang Maier1
    • Yongbin Li1
    • Show N_FILTERS more
    • Contributor
    • Helena Rasche6
    • Björn Grüning5
    • Saskia Hiltemann5
    • Bérénice Batut3
    • Wolfgang Maier3
    • Cristóbal Gallardo2
    • Hans-Rudolf Hotz2
    • Jasper Ouwerkerk2
    • Lucille Delisle2
    • Amirhossein Naghsh Nilchi1
    • Anika Erxleben1
    • Anthony Bretaudeau1
    • Armin Dadras1
    • Clea Siguret1
    • Clemens Blank1
    • Deepti Varshney1
    • Ekaterina Polkh1
    • Engy Nasr1
    • Florian Heyl1
    • Graeme Tyson1
    • José Manuel Domínguez1
    • Linelle Abueg1
    • Maria Doyle1
    • Marius van den Beek1
    • Martin Čech1
    • Matti Hoch1
    • Mehmet Tekman1
    • Mira Kuntz1
    • Niall Beard1
    • Nicola Soranzo1
    • Paul Zierep1
    • Pavankumar Videm1
    • Sanjay Kumar Srikakulam1
    • Scott Cain1
    • Simon Bray1
    • William Durand1
    • Show N_FILTERS more
    • Resource type
    • e-learning6
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets6
    • Associated Workflows5
    • Show N_FILTERS more
    • Collection
    • ELIXIR Federated Human Data Community1
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Show materials with broken links
  • Show archived materials

Training materials

  • Subscribe via email
  • Harvest using OAI-PMH

Email Subscription

Harvest using OAI-PMH

Exchange content using OAI-PMH

Use an OAI-PMH compatible tool to harvest metadata using the OAI-PMH endpoint. In particular, this endpoint can be used for exchanging content between different TeSS instances. See the TeSS documentation for more details.

Register training material

Tools: Galaxy

and Keywords: cyoa

6 materials found
  • e-learning

    Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition

    • Beginner
    Metagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis …
  • e-learning

    Pathway analysis with the MINERVA Platform

    •• Intermediate
    Transcriptomics Transcriptomics bulk cyoa rna-seq viz
  • e-learning

    Refining Genome Annotations with Apollo (eukaryotes)

    •• Intermediate
    Genomics Genome Annotation apollo2 biodiversity cyoa eukaryote gmod jbrowse1
  • e-learning

    Trio Analysis using Synthetic Datasets from RD-Connect GPAP

    ••• Advanced
    Genetic variation Variant Analysis cyoa
  • e-learning

    Reference-based RNA-Seq data analysis

    • Beginner
    Transcriptomics QC Transcriptomics bulk collections cyoa deutsch drosophila español italiano …
  • e-learning

    Data Manipulation Olympics

    • Beginner
    Software engineering Foundations of Data Science cyoa galaxy-intro
Training eSupport System
[email protected]
Contribute
About TeSSHub
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSSHub has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.