Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Providers
    • Nodes
    • Spaces

TeSS makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSS in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • DNA variation4
    • Genetic variation4
    • Genomic variation4
    • Mutation4
    • Polymorphism4
    • Somatic mutations4
    • Biological processes1
    • Biological sequences1
    • Exomes1
    • Genome annotation1
    • Genomes1
    • Genomics1
    • Molecular biology1
    • Personal genomics1
    • Sequence analysis1
    • Sequence databases1
    • Synthetic genomics1
    • Viral genomics1
    • Virology1
    • Whole genomes1
    • Show N_FILTERS more
    • Tool
    • Galaxy5
    • BWA3
    • MAFFT3
    • SAMtools3
    • fastp3
    • QualiMap2
    • compute_sequence_length2
    • iVar2
    • BLAST1
    • BamTools1
    • Nextclade1
    • SRA Software Toolkit1
    • UCSC Genome Browser Utilities1
    • VAPOR1
    • ViralZone1
    • iqtree1
    • lofreq1
    • pangolin1
    • seqtk1
    • snpEff1
    • varVAMP1
    • Show N_FILTERS more
    • Content provider
    • GTN5
    • SIB Swiss Institute of Bioinformatics1
    • Show N_FILTERS more
    • Keyword
    • R319
    • Transcriptomics151
    • Genomics147
    • Python142
    • Next generation sequencing115
    • RNA-seq114
    • Data management101
    • Bioinformatics94
    • Statistics77
    • FAIR data75
    • Galaxy Server administration68
    • Machine learning67
    • FAIR65
    • Reproducibility65
    • Data science64
    • Unix/Linux60
    • Single-cell sequencing59
    • jupyter-notebook54
    • Proteomics53
    • Workflows51
    • Foundations of Data Science50
    • Data visualization48
    • Variant analysis48
    • Version control48
    • data management48
    • biodiversity47
    • Development in Galaxy45
    • Genome assembly43
    • Statistics and machine learning43
    • Single Cell41
    • microgalaxy41
    • training38
    • General36
    • Genome annotation36
    • Metagenomics34
    • FAIR Data, Workflows, and Research33
    • Genome Annotation31
    • Microbiome31
    • Nextflow31
    • Ecology30
    • programming30
    • Genome28
    • Molecular28
    • Assembly27
    • Contributing to the Galaxy Training Material27
    • Metadata27
    • Using Galaxy and Managing your Data27
    • metagenomics27
    • Data analysis26
    • Epigenetics26
    • Long read sequencing26
    • Phylogenetics25
    • RDM25
    • Data reuse24
    • FAIR principles24
    • Containerization23
    • Docker22
    • Microbiology22
    • data stewardship22
    • High performance computing21
    • Open Science21
    • Rare Diseases & Research21
    • Shiny21
    • Spatial transcriptomics21
    • ansible21
    • reproducible research21
    • sensitive data19
    • CfRR19
    • ChIP-seq19
    • FAIR Data19
    • Galaxy19
    • Imaging19
    • Metabolomics19
    • REDCap19
    • git-gat19
    • life-sciences19
    • metadata19
    • scientific computing19
    • Cloud computing18
    • Comparative genomics18
    • Programming18
    • Variant Analysis18
    • interactive-tools18
    • Artificial intelligence17
    • Climate17
    • Data sharing17
    • Sequence analysis17
    • Teaching and Hosting Galaxy training17
    • work-in-progress17
    • HemaFAIR16
    • Introduction to Galaxy Analyses16
    • Research Data Management16
    • Roslin Institute16
    • Shell16
    • fair16
    • jbrowse116
    • Data mining15
    • Quarto15
    • bioinformatics15
    • earth-system15
    • Show N_FILTERS more
    • Competency level
    • Beginner3
    • Intermediate2
    • Advanced1
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International6
    • Show N_FILTERS more
    • Target audience
    • Students5
    • Students, postdocs, and researchers, from any scientific environment (academia, facilities, companies, etc.) interested in viral data, as well as anyone looking for virion and viral genome images for use in teaching or publications.1
    • Show N_FILTERS more
    • Author
    • Wolfgang Maier4
    • Anton Nekrutenko1
    • Bérénice Batut1
    • Daniel Blankenberg1
    • Dave Clements1
    • Elischa Berger1
    • Marius van den Beek1
    • Monique Zahn1
    • Tomas Klingström1
    • Verena Moosmann1
    • Show N_FILTERS more
    • Contributor
    • Wolfgang Maier5
    • Helena Rasche4
    • Saskia Hiltemann4
    • Anton Nekrutenko3
    • Björn Grüning3
    • Beatriz Serrano-Solano1
    • Bérénice Batut1
    • Jasper Ouwerkerk1
    • Mélanie Petera1
    • Nicola Soranzo1
    • Teresa Müller1
    • Verena Moosmann1
    • Show N_FILTERS more
    • Resource type
    • e-learning6
    • Show N_FILTERS more
    • Related resource
    • Associated Workflows3
    • Associated Training Datasets1
    • Show N_FILTERS more
    • Node
    • Switzerland1
    • Show N_FILTERS more
    • Status
    • Active1
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Show materials with broken links
  • Show archived materials

Training materials

  • Subscribe via email

Email Subscription

Register training material

Keywords: virology

6 materials found
  • e-learning

    Primer and primer scheme design for pan-specific detection and sequencing of viral pathogens across genotypes

    • Beginner
    Sequence analysis Sequence analysis virology
  • e-learning

    ViralZone: Studying viral diversity

    ELIXIR node event
    • Beginner
    Virology Genomics Molecular biology virology
  • e-learning

    Pox virus genome analysis from tiled-amplicon sequencing data

    ••• Advanced
    Genetic variation Variant Analysis one-health virology
  • e-learning

    Avian influenza viral strain analysis from gene segment sequencing data

    •• Intermediate
    Genetic variation Variant Analysis one-health virology
  • e-learning

    From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis

    • Beginner
    Genetic variation Variant Analysis covid19 one-health virology
  • e-learning

    Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data

    •• Intermediate
    Genetic variation Variant Analysis covid19 one-health virology
Training eSupport System
[email protected]
Contribute
About TeSS
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.