Training materials
Scientific topics: Genomics
and Licence: Creative Commons Attribution 4.0 International
75 materials found
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ELIXIR TeSS
e-learning
Bacterial genome quality control
• BeginnerGenomics Microbiology Genome Annotation microgalaxy work-in-progress -
ELIXIR TeSS
e-learning
Bacterial pangenomics
• BeginnerGenomics Microbiology Genome Annotation -
ELIXIR TeSS
e-learning
Dataset construction for bacterial comparative genomics
• BeginnerGenomics Microbiology Genome Annotation microgalaxy work-in-progress -
ELIXIR TeSS
e-learning
Query an annotated mobile genetic element database to identify and annotate genetic elements (e.g. plasmids) in metagenomics data
• BeginnerMetagenomics Microbial ecology Genomics Microbiology Sequence analysis Mobile genetic elements Microbiome -
ELIXIR TeSS
sib-swiss/cancer-variants-training
Genomics Sequencing Variant pattern analysis Variant analysis Next generation sequencing Genomics
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ELIXIR TeSS
fhdsl/Choosing_Genomics_Tools
ChIP-seq Epigenetics Genomics Sequencing Transcriptomics RNA-Seq Single-cell sequencing Variant pattern analysis Genome annotation Genomics …
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ELIXIR TeSS
e-learning
Decontamination of a genome assembly
• BeginnerSequence assembly Genomics Biodiversity Assembly biodiversity -
ELIXIR TeSS
e-learning
Assembly of the mitochondrial genome from PacBio HiFi reads
• BeginnerSequence assembly Genomics Biodiversity Mitochondria Assembly biodiversity -
ELIXIR TeSS
e-learning
Genome annotation with Helixer
•• IntermediateGenomics Biodiversity Zoology Plant biology Genome Annotation biodiversity eukaryota helixer jbrowse1 -
ELIXIR TeSS
e-learning
Quality and contamination control in bacterial isolate using Illumina MiSeq Data
• BeginnerSequence analysis Whole genome sequencing Genomics Microbiology Microbial ecology Sequence analysis bacteria illumina microgalaxy