Training materials
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video
Welcome to the Research Data Management Video Series
Data management
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Training materials, Course materials
Linux commands and Genomics data formats for biologists
• BeginnerGenomics Bioinformatics FASTA FASTQC GTF ChIP-Seq Genome browser -
Tutorial
Glycoproteomics with FragPipe
•• IntermediatePeptide database search Peptide identification glycomics glycoproteomics Mass spectrometry -
Video
Protein Prospector: Glycopeptide Analysis using MS-Filter with Glycan Scoring
•• IntermediatePeptide identification Peptide database search glycoproteomics Mass spectrometry -
Nanopublication Tutorial at ESWC 2025
•• IntermediateFAIR data Computer science Data management nanopublication Semantic Web decentralization -
Course materials
Applied Metagenomics - AM22 (October 11-14, 2022)
•• IntermediateMetagenomics Metagenomic sequencing Metagenomics metagenomics Genomic data Genomic sequences genomics Taxonomic concepts Genome assembly Genome Assembly … -
Course materials
Applied Metagenomics - AM21 (November 1-5, 2021)
•• IntermediateMetagenomics Metagenomic sequencing Metagenomics metagenomics Genomic data Genomic sequences genomics Taxonomic concepts Genome assembly Genome Assembly … -
e-learning, Video, Webinar
Using OpenCloning, an Open-Source web application to plan and document cloning and genome engineering
• BeginnerGenetic engineering Molecular biology Synthetic biology Metabolic engineering Genetics web application Genetic Engineering Molecular biology genome engineering Genetics -
Tutorial
NUTRIOME Workshop Tutorials
Metabolomics Transcriptomics RDM networks and pathways -
Blog post
Making BridgeDb Derby files with Groovy
•• IntermediateBridgeDb Groovy