Training materials
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Presentation, Exercise
Agentic Coding with GitHub Copilot
• BeginnerComputer science Artificial Intelligence Coding -
Presentation, Video
E-PAN Workshop 2026 | Enhancing Pan-Genome Analysis in Plants
• BeginnerPlant biology Genomics FAIR data Pangenome Visualization Quality Control Data sharing plant science -
Pan genomics tutorial using Minima2 and seq-seq-pan
• Beginnerpan genomics genome alignment Minimap2 alignment seq-seq-pan R visualization genome alignment -
Online material, hands-on tutorial
Introduction to Docker and Singularity
• BeginnerReproducibility Container Singularity -
hands-on tutorial
Bulk RNASeq analysis
•• IntermediateTranscriptomics Gene expression Differential gene expression profiling Expression analysis Data analysis NGS RNASeq transcriptomics -
e-learning
Basic statistics in Prism
• BeginnerStatistics and probability statistics -
e-learning
Basic statistics theory
• BeginnerStatistics and probability statistics -
slides, scripts
Bioinformatics for Proteomics
• BeginnerProteomics Proteomics -
slides, R Shiny application
Proteomics Data Analysis (PDA)
•• IntermediateProteomics proteomics quantitative proteomics -
hands-on tutorial
A tour of Machine Learning
•• IntermediateMachine learning Classification Deep Learning Machine Learning
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