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Tools: SAMtools

and Related resources: Associated Training Datasets

21 materials found
  • e-learning

    Differential abundance testing of small RNAs

    • Beginner
    Transcriptomics Transcriptomics
  • e-learning

    1: RNA-Seq reads to counts

    • Beginner
    Transcriptomics QC Transcriptomics collections mouse
  • e-learning

    Small Non-coding RNA Clustering using BlockClust

    • Beginner
    Transcriptomics Transcriptomics
  • e-learning

    Identifying tuberculosis transmission links: from SNPs to transmission clusters

    •• Intermediate
    Evolutionary biology Genomics Microbiology Infectious disease DNA polymorphism Evolution microgalaxy one-health prokaryote
  • e-learning

    NGS data logistics

    • Beginner
    Introduction to Galaxy Analyses
  • slides

    Introduction to ATAC-Seq data analysis

    • Beginner
    Epigenomics Epigenetics
  • slides

    ChIP-seq data analysis

    • Beginner
    Epigenomics Epigenetics
  • slides

    Unicycler assembly of SARS-CoV-2 genome with preprocessing to remove human genome reads

    • Beginner
    Sequence assembly Assembly covid19
  • slides

    Dealing with Cross-Contamination in Fixed Barcode Protocols

    • Beginner
    Transcriptomics Single Cell
  • e-learning

    Mapping

    • Beginner
    Sequence analysis Mapping Sequence analysis deutsch español italiano
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