Training materials
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e-learning
Assembly of the mitochondrial genome from PacBio HiFi reads
• BeginnerSequence assembly Genomics Biodiversity Mitochondria Assembly biodiversity -
e-learning
Genome annotation with Helixer
•• IntermediateGenomics Biodiversity Zoology Plant biology Genome Annotation biodiversity eukaryota helixer jbrowse1 -
e-learning
Marine Omics identifying biosynthetic gene clusters
• BeginnerEcology Biodiversity Ecology biodiversity earth-system marine omics ocean -
e-learning
From NDVI data with OpenEO to time series visualisation with Holoviews
• BeginnerEcology Biodiversity Ecology NDVI copernicus earth-system holoviews land degradation -
e-learning
QGIS Web Feature Services
• BeginnerEcology Biodiversity Ecology GIS Geographical Information System OGC WFS biodiversity earth-system maps … -
e-learning
Creating FAIR Quality assessment reports and draft of Data Papers from EML metadata with MetaShRIMPS
• BeginnerEcology Biodiversity EML Ecology FAIR biodiversity data paper metadata -
e-learning
Creating metadata using Ecological Metadata Language (EML) standard with EML Assembly Line functionalities
• BeginnerEcology Biodiversity EML Ecology FAIR biodiversity data paper ecology metadata -
e-learning
Checking expected species and contamination in bacterial isolate
• BeginnerEcology Biodiversity Whole genome sequencing Genomics Microbiology Microbial ecology Ecology bacteria illumina microgalaxy -
e-learning
ERGA post-assembly QC
• BeginnerSequence assembly Genomics Biodiversity Assembly QC animals assembly biodiversity genome plants -
e-learning
Sentinel 2 biodiversity
• BeginnerEcology Biodiversity Ecology Remote sensing biodiversity