Training materials
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e-learning
Inferring single cell trajectories with Scanpy (Python)
• BeginnerTranscriptomics MIGHTS Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Hands-on for 'Trajectory Analysis using Python (Jupyter Notebook) in Galaxy' tutorial
Transcriptomics transcriptomics, single-cell, 10x, paper-replication, interactive-tools
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e-learning
RNA-RNA interactome data analysis
• BeginnerTranscriptomics Transcriptomics -
e-learning
RNA-Seq analysis with AskOmics Interactive Tool
• BeginnerTranscriptomics Transcriptomics -
e-learning
Network analysis with Heinz
• BeginnerTranscriptomics Transcriptomics metatranscriptomics network analysis -
e-learning
Whole transcriptome analysis of Arabidopsis thaliana
• BeginnerTranscriptomics Transcriptomics miRNA plants stress tolerance -
e-learning
De novo transcriptome reconstruction with RNA-Seq
• BeginnerTranscriptomics Transcriptomics -
e-learning
Visualization of RNA-Seq results with Volcano Plot
• BeginnerTranscriptomics Transcriptomics -
e-learning
De novo transcriptome assembly, annotation, and differential expression analysis
• BeginnerTranscriptomics Transcriptomics -
e-learning
Visualization of RNA-Seq results with Volcano Plot in R
•• IntermediateTranscriptomics Transcriptomics interactive-tools