Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • Spaces
  • Events
  • Materials
  • Workflows
  • Collections
  • e-Learning
  • Learning paths
  • Directory
    • Providers
    • Nodes

TeSSHub makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSSHub in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Exomes36
    • Genome annotation36
    • Genomes36
    • Genomics36
    • Personal genomics36
    • Synthetic genomics36
    • Viral genomics36
    • Whole genomes36
    • Biodiversity31
    • Comparative transcriptomics30
    • Transcriptome30
    • Transcriptomics30
    • Biological sequences29
    • Sequence analysis29
    • Sequence databases29
    • Community analysis27
    • Environmental microbiology27
    • Microbial ecology27
    • Microbiome27
    • Molecular community analysis27
    • Bottom-up proteomics26
    • Discovery proteomics26
    • MS-based targeted proteomics26
    • MS-based untargeted proteomics26
    • Metaproteomics26
    • Peptide identification26
    • Protein and peptide identification26
    • Proteomics26
    • Quantitative proteomics26
    • Targeted proteomics26
    • Top-down proteomics26
    • Metagenomics25
    • Shotgun metagenomics25
    • Assembly24
    • Bayesian methods24
    • Biostatistics24
    • Descriptive statistics24
    • Gaussian processes24
    • Inferential statistics24
    • Markov processes24
    • Multivariate statistics24
    • Probabilistic graphical model24
    • Probability24
    • Sequence assembly24
    • Statistics24
    • Statistics and probability24
    • Computational ecology20
    • Ecoinformatics20
    • Ecological informatics20
    • Ecology20
    • Ecosystem science20
    • Antimicrobial stewardship18
    • Medical microbiology18
    • Microbial genetics18
    • Microbial physiology18
    • Microbial surveillance18
    • Microbiological surveillance18
    • Microbiology18
    • Molecular infection biology18
    • Molecular microbiology18
    • Diffraction experiment17
    • Imaging17
    • Microscopy17
    • Microscopy imaging17
    • Optical super resolution microscopy17
    • Photonic force microscopy17
    • Photonic microscopy17
    • Taxonomy14
    • DNA variation13
    • Genetic variation13
    • Genomic variation13
    • Mutation13
    • Polymorphism13
    • Somatic mutations13
    • Computational chemistry8
    • Epigenomics8
    • De novo genome sequencing6
    • Epidemiology6
    • Exometabolomics6
    • Genome sequencing6
    • LC-MS-based metabolomics6
    • MS-based metabolomics6
    • MS-based targeted metabolomics6
    • MS-based untargeted metabolomics6
    • Mass spectrometry-based metabolomics6
    • Metabolites6
    • Metabolome6
    • Metabolomics6
    • Metabonomics6
    • NMR-based metabolomics6
    • Public health6
    • Public health and epidemiology6
    • WGS6
    • Whole genome resequencing6
    • Whole genome sequencing6
    • Communicable disease5
    • DNA metabarcoding5
    • Environmental metabarcoding5
    • Gene and protein families5
    • Gene families5
    • Show N_FILTERS more
    • Tool
    • Galaxy266
    • FastQC26
    • SAMtools20
    • MultiQC17
    • BWA16
    • BEDTools14
    • SCANPY14
    • fastp12
    • Falco11
    • JBrowse11
    • ggplot211
    • scikit-learn11
    • BUSCO10
    • DeepTools10
    • Galaxy Image Analysis10
    • QUAST9
    • Trimmomatic9
    • scikit-image9
    • taxonomy_krona_chart9
    • Cutadapt8
    • GEMINI8
    • BCFtools7
    • BLAST7
    • Bandage7
    • FreeBayes7
    • NanoPlot7
    • STAR7
    • Flye6
    • MaxQuant6
    • Open Babel6
    • msConvert6
    • BamTools5
    • HISAT25
    • MAFFT5
    • Minimap25
    • MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC5
    • anndata5
    • annotatemyids5
    • compute_sequence_length5
    • gffread5
    • kraken25
    • seqtk5
    • Biopython4
    • Bowtie 24
    • Bwa-mem24
    • FASTX-Toolkit4
    • GOseq4
    • Galactic Circos4
    • KrakenTools4
    • MSstats4
    • MetaPhlAn4
    • Newick Utilities4
    • RSeQC4
    • SRA Software Toolkit4
    • The Protein Data Bank (PDB)4
    • Trim Galore4
    • UniProt4
    • Unicycler4
    • bx-python4
    • mothur4
    • Bracken3
    • Cardinal3
    • DESeq23
    • Diamond3
    • DropletUtils3
    • GenomeScope 2.03
    • InterProScan (EBI)3
    • MACS3
    • Merqury3
    • OMArk3
    • RDKit3
    • Salmon3
    • Stacks3
    • Vcflib3
    • gfastats3
    • snippy3
    • Bakta2
    • Bio3D2
    • COMBAT-TB Workbench2
    • CellProfiler2
    • ChEMBL2
    • Circos2
    • Clustal 1.8 (Clustal W, Clustal X)2
    • FastTree2
    • FeatureCounts2
    • GOEnrichment2
    • GraPhlAn2
    • Gromacs2
    • HUMAnN22
    • Helixer2
    • MDAnalysis2
    • MEME2
    • Medaka2
    • NCBI Resources2
    • QualiMap2
    • R2
    • Racon2
    • Recentrifuge2
    • RepeatMasker2
    • SeqCode2
    • Show N_FILTERS more
    • Content provider
    • GTN272
    • Show N_FILTERS more
    • Keyword
    • biodiversity35
    • microgalaxy35
    • Single Cell30
    • Proteomics26
    • Microbiome23
    • Statistics and machine learning23
    • Ecology20
    • Genome Annotation18
    • Transcriptomics18
    • Imaging17
    • Assembly16
    • Variant Analysis13
    • jbrowse113
    • prokaryote11
    • Image segmentation10
    • gmod10
    • assembly9
    • 10x8
    • Climate8
    • Computational chemistry8
    • DDA8
    • Epigenetics8
    • Introduction to Galaxy Analyses8
    • Sequence analysis8
    • earth-system8
    • eukaryote8
    • plants8
    • EBV dataset7
    • EBV workflow7
    • metabolomics7
    • nanopore7
    • one-health7
    • paper-replication7
    • MIGHTS6
    • Metabolomics6
    • Overlay6
    • Using Galaxy and Managing your Data6
    • covid196
    • data management6
    • illumina6
    • interactive-tools6
    • metabarcoding6
    • metagenomics6
    • ocean6
    • transcriptomics6
    • work-in-progress6
    • Digital Humanities5
    • cyoa5
    • deconvolution5
    • español5
    • label-TMT115
    • mouse5
    • 16S4
    • Conversion4
    • DIA4
    • Multi-channel image4
    • Object feature extraction4
    • QC4
    • bacteria4
    • deutsch4
    • galaxy-intro4
    • genetic composition EBV class4
    • italiano4
    • pangeo4
    • single-cell4
    • workflows4
    • ChIP-seq3
    • Deep learning3
    • Evolution3
    • Image annotation3
    • RAD-seq3
    • Synthetic Biology3
    • amr3
    • bulk3
    • collections3
    • computational-chemistry3
    • data import3
    • ecology3
    • epigenetics3
    • eukaryota3
    • exposomics3
    • gbif3
    • gc-ms3
    • human3
    • imaging3
    • mass spectrometry imaging3
    • metatranscriptomics3
    • modeling3
    • proteogenomics3
    • rna-seq3
    • sc_formats3
    • species populations EBV class3
    • virology3
    • 3D image2
    • Braker32
    • Data handling2
    • Data management2
    • Data sharing2
    • Deep Learning2
    • Fluorescence microscopy2
    • Show N_FILTERS more
    • Competency level
    • Beginner199
    • Intermediate66
    • Advanced7
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International272
    • Show N_FILTERS more
    • Target audience
    • Students271
    • Instructors1
    • Show N_FILTERS more
    • Author
    • Bérénice Batut34
    • Saskia Hiltemann18
    • Björn Grüning15
    • Subina Mehta15
    • Yvan Le Bras13
    • Anthony Bretaudeau12
    • Helena Rasche12
    • Mehmet Tekman11
    • Wolfgang Maier11
    • Anton Nekrutenko10
    • Maria Doyle10
    • Marie Josse10
    • Melanie Föll10
    • Pavankumar Videm10
    • Pratik Jagtap10
    • Simon Bray10
    • Wendi Bacon10
    • Anne Fouilloux9
    • Anup Kumar8
    • Cristóbal Gallardo8
    • Delphine Lariviere8
    • Timothy J. Griffin8
    • Daniel Blankenberg7
    • Diana Chiang Jurado7
    • Julia Jakiela7
    • Matthias Fahrner7
    • Paul Zierep7
    • Praveen Kumar7
    • Anika Erxleben6
    • Anna Syme6
    • Dave Clements6
    • Emma Leith6
    • Florian Christoph Sigloch6
    • Leonid Kostrykin6
    • Nicola Soranzo6
    • Simon Gladman6
    • Dechen Bhuming5
    • Erwan Corre5
    • James Johnson5
    • Katherine Do5
    • Ray Sajulga5
    • Riccardo Massei5
    • Stéphanie Robin5
    • Alexandre Cormier4
    • Alireza Khanteymoori4
    • Amirhossein Naghsh Nilchi4
    • Beatriz Serrano-Solano4
    • Christopher Barnett4
    • Clemens Blank4
    • Coline Royaux4
    • Daniela Schneider4
    • Jeremy Goecks4
    • Joachim Wolff4
    • Junhao Qiu4
    • Kaivan Kamali4
    • Laura Leroi4
    • Lucille Delisle4
    • Mallory Freeberg4
    • Marisa Loach4
    • Marius van den Beek4
    • Paulo Cilas Morais Lyra Junior4
    • Vivek Bhardwaj4
    • Alex Ostrovsky3
    • Alyssa Pybus3
    • Bazante Sanders3
    • Belinda Phipson3
    • Fidel Ramirez3
    • Florian Heyl3
    • Gildas Le Corguillé3
    • Guillaume Gricourt3
    • Helge Hecht3
    • Ioana Popescu3
    • Jean-Loup Faulon3
    • Joan Hérisson3
    • Katarzyna Kamieniecka3
    • Kenza Bazi-Kabbaj3
    • Khaled Jum'ah3
    • Krzysztof Poterlowicz3
    • Marie Crane3
    • Mo Heydarian3
    • Morgan Howells3
    • Nadia Goué3
    • Polina Polunina3
    • Romane LIBOUBAN3
    • Tharindu Senapathi3
    • Thomas Duigou3
    • Anne Pajon2
    • Christoph Stritt2
    • Daniela Brites2
    • David Christiany2
    • Ekaterina Polkh2
    • Elisa Michon2
    • Engy Nasr2
    • Florence Combes2
    • Friederike Dündar2
    • Galo A. Goig2
    • Hans-Rudolf Hotz2
    • Harriet Dashnow2
    • Jayadev Joshi2
    • Jean-Karim Hériché2
    • Show N_FILTERS more
    • Contributor
    • Saskia Hiltemann245
    • Björn Grüning204
    • Helena Rasche196
    • Bérénice Batut110
    • Nicola Soranzo61
    • Pavankumar Videm39
    • Niall Beard38
    • Anthony Bretaudeau37
    • Cristóbal Gallardo34
    • Armin Dadras33
    • Gildas Le Corguillé32
    • Martin Čech32
    • Wendi Bacon30
    • Mehmet Tekman29
    • Teresa Müller29
    • Wolfgang Maier29
    • Melanie Föll28
    • William Durand26
    • Beatriz Serrano-Solano23
    • Simon Bray20
    • Yvan Le Bras20
    • Maria Doyle19
    • Anup Kumar18
    • Leonid Kostrykin17
    • Tristan Reynolds17
    • Marie Josse16
    • Deepti Varshney15
    • Subina Mehta15
    • Paul Zierep14
    • Julia Jakiela13
    • Diana Chiang Jurado12
    • Lucille Delisle12
    • Nate Coraor12
    • Anton Nekrutenko10
    • Marisa Loach10
    • Pablo Moreno10
    • Anne Fouilloux9
    • Simon Gladman9
    • Amirhossein Naghsh Nilchi8
    • Daniela Schneider8
    • Delphine Lariviere8
    • Marius van den Beek8
    • Matthias Bernt8
    • Mélanie Petera8
    • Stéphanie Robin8
    • Anna Syme7
    • David López7
    • Verena Moosmann7
    • Clemens Blank6
    • Hans-Rudolf Hotz6
    • Mallory Freeberg6
    • Morgan Howells6
    • Pratik Jagtap6
    • Alireza Khanteymoori5
    • Bert Droesbeke5
    • Christopher Barnett5
    • Florian Christoph Sigloch5
    • Florian Heyl5
    • Kaivan Kamali5
    • Peter van Heusden5
    • Timothy J. Griffin5
    • Alexandre Cormier4
    • Clea Siguret4
    • Linelle Abueg4
    • Riccardo Massei4
    • Bazante Sanders3
    • Coline Royaux3
    • Dave Clements3
    • Ekaterina Polkh3
    • Engy Nasr3
    • Enis Afgan3
    • Fabio Cumbo3
    • Khaled Jum'ah3
    • Miaomiao Zhou3
    • Natalie Whitaker-Allen3
    • Paulo Cilas Morais Lyra Junior3
    • Timon Schlegel3
    • Alex Ostrovsky2
    • Anika Erxleben2
    • Carlos Chee Mendonça2
    • Christine Oger2
    • Christoph Stritt2
    • Donny Vrins2
    • Fidel Ramirez2
    • Florence Combes2
    • Graeme Tyson2
    • Igor Makunin2
    • Jayadev Joshi2
    • Jennifer Hillman-Jackson2
    • Joachim Wolff2
    • Jonathan Kreplak2
    • Jonathan Manning2
    • Katarzyna Kamieniecka2
    • Kenza Bazi-Kabbaj2
    • Laura Leroi2
    • Mateo Boudet2
    • Michael Thang2
    • Nadia Goué2
    • Romane LIBOUBAN2
    • Solenne Correard2
    • Show N_FILTERS more
    • Resource type
    • e-learning
    • slides36
    • Show N_FILTERS more
    • Related resource
    • Associated Workflows
    • Associated Training Datasets289
    • Jupyter Notebook (with Solutions)49
    • Jupyter Notebook (without Solutions)49
    • The Carpentries7
    • Quarto/RMarkdown Notebook6
    • GitHub1
    • OpenCloning1
    • OpenRefine1
    • pydna1
    • Show N_FILTERS more
    • Collection
    • ELIXIR Biodiversity Community4
    • ELIXIR hCNV community - collection of courses and materials.1
    • ELIXIR Federated Human Data Community1
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Show materials with broken links
  • Show archived materials

e-Learning

  • Subscribe via email

Email Subscription

Register training material

Resource type: e-learning

and Related resources: Associated Workflows

272 e-learning materials found
  • e-learning

    Peptide and Protein ID using SearchGUI and PeptideShaker

    • Beginner
    Proteomics DDA HeLa Proteomics
  • e-learning

    Library Generation for DIA Analysis

    •• Intermediate
    Proteomics DIA Proteomics
  • e-learning

    DIA Analysis using OpenSwathWorkflow

    •• Intermediate
    Proteomics DIA Proteomics
  • e-learning

    Statistical analysis of DIA data

    •• Intermediate
    Proteomics DIA Proteomics
  • e-learning

    Proteogenomics 3: Novel peptide analysis

    •• Intermediate
    Proteomics Proteomics proteogenomics
  • e-learning

    Machine Learning Modeling of Anticancer Peptides

    •• Intermediate
    Proteomics ML Proteomics cancer
  • e-learning

    Detection and quantitation of N-termini (degradomics) via N-TAILS

    •• Intermediate
    Proteomics Proteomics
  • e-learning

    MaxQuant and MSstats for the analysis of label-free data

    •• Intermediate
    Proteomics Proteomics label-free
  • e-learning

    Label-free data analysis using MaxQuant

    • Beginner
    Proteomics DDA Proteomics label-free
  • e-learning

    Peptide and Protein ID using OpenMS tools

    ••• Advanced
    Proteomics DDA HeLa Proteomics
  • 1
  • 2
  • …
  • 18
  • 19
  • 20
  • 21
  • 22
  • 23
  • 24
  • 25
  • 26
  • 27
  • 28
Training eSupport System
[email protected]
Contribute
About TeSSHub
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSSHub has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.