Training materials
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e-learning
Ensembl: Filmed Perl API Workshop
Genomics Genome sequencing Sequence alignments API Programmatic access Perl
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e-learning
Large genome assembly and polishing
• BeginnerSequence assembly Genomics Biodiversity Assembly assembly biodiversity nanopore plants polishing -
e-learning
ArrayExpress in BioStudies: Quick tour
Functional genomics Genomics
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e-learning
Functional genomics I: Introduction and designing experiments
Functional genomics Gene expression Genomics Introduction Gramene database Designing functional genomics experiments
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e-learning
Long non-coding RNAs (lncRNAs) annotation with FEELnc
•• IntermediateGenomics Genome Annotation eukaryote -
e-learning
Comparative gene analysis in unannotated genomes
• BeginnerGenomics Gene and protein families Sequence analysis Phylogeny Comparative genomics Genome Annotation annotation biodiversity cookbook eukaryote … -
e-learning
Refining Genome Annotations with Apollo (eukaryotes)
•• IntermediateGenomics Genome Annotation apollo2 biodiversity cyoa eukaryote gmod jbrowse1 -
e-learning
M. tuberculosis Variant Analysis
•• IntermediateGenetic variation Genomics Microbiology Sequence assembly Public health and epidemiology Infectious disease Variant Analysis microgalaxy one-health prokaryote … -
e-learning
Microbial Variant Calling
• BeginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis gmod jbrowse1 microgalaxy … -
e-learning
Calling variants in non-diploid systems
• BeginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis microgalaxy prokaryote