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Scientific topic
- Genomes
- Comparative transcriptomics42
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- Biological sequences32
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- WGS6
- Whole genome resequencing6
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Tool
- Galaxy41
- JBrowse13
- BUSCO6
- FastQC6
- QUAST4
- gffread4
- Apollo3
- BEDTools3
- Bandage3
- Cutadapt3
- Minimap23
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- Bwa-mem22
- COMBAT-TB Workbench2
- Clustal 1.8 (Clustal W, Clustal X)2
- DeepTools2
- Diamond2
- Falco2
- Flye2
- GECKO2
- GenomeScope 2.02
- Helixer2
- InterProScan (EBI)2
- MAGeCK2
- NanoPlot2
- Recentrifuge2
- TRANSIT2
- eggNOG-mapper v22
- fastp2
- gfastats2
- tbl2gff32
- AUGUSTUS1
- BWA1
- BamTools1
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- FEELnc1
- Filtlong1
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- antiSMASH1
- bx-python1
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- compute_sequence_length1
- funannotate1
- ggplot21
- kraken21
- orfipy1
- purge_dups1
- shovill1
- staramr1
- tb-profiler1
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Content provider
- GTN42
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Keyword
- Genome Annotation26
- microgalaxy17
- prokaryote15
- biodiversity14
- jbrowse113
- gmod10
- eukaryote9
- Assembly8
- bacteria5
- illumina5
- one-health4
- Variant Analysis3
- assembly3
- essential genes3
- eukaryota3
- Braker32
- Evolution2
- amr2
- apollo22
- maker2
- nanopore2
- plants2
- tnseq2
- CRISPR1
- Ecology1
- Helixer1
- Microbiome1
- Sequence Analysis1
- VGP1
- annotation1
- cell line1
- cookbook1
- cyoa1
- evolution1
- genome editing1
- helixer1
- pacbio1
- pangenome1
- phylogenetics1
- phylogeny1
- polishing1
- tuberculosis1
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- work-in-progress1
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Competency level
- Beginner30
- Intermediate11
- Advanced1
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Licence
- Creative Commons Attribution 4.0 International42
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Target audience
- Students42
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Author
- Anthony Bretaudeau10
- Bérénice Batut8
- Delphine Lariviere7
- Anna Syme5
- Anton Nekrutenko5
- Simon Gladman5
- Bazante Sanders3
- Helena Rasche3
- Romane LIBOUBAN3
- Torsten Seemann3
- Alex Ostrovsky2
- Christoph Stritt2
- Daniela Brites2
- Esteban Perez-Wohlfeil2
- Galo A. Goig2
- Maria Doyle2
- Mateo Boudet2
- Nathan Dunn2
- Stéphanie Robin2
- Alexandre Cormier1
- Anika Erxleben1
- Björn Grüning1
- Brandon Pickett1
- Clea Siguret1
- Cristóbal Gallardo1
- Didier Debroas1
- Erwan Corre1
- Giulio Formenti1
- Jonathan Kreplak1
- Kenji Fujihara1
- Laura Leroi1
- Linelle Abueg1
- Marcella Sozzoni1
- Nadia Goué1
- Niklas Mayle1
- Paul Zierep1
- Peter van Heusden1
- Saim Momin1
- Sylvia Mahara1
- Thoba Lose1
- Twishi Gulati1
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Contributor
- Saskia Hiltemann36
- Helena Rasche33
- Björn Grüning32
- Bérénice Batut31
- Anthony Bretaudeau21
- Cristóbal Gallardo9
- Nicola Soranzo8
- Deepti Varshney7
- Niall Beard7
- Tristan Reynolds7
- Anton Nekrutenko5
- Delphine Lariviere5
- Teresa Müller5
- Wolfgang Maier5
- Anna Syme4
- Gildas Le Corguillé4
- Peter van Heusden4
- Bazante Sanders3
- Maria Doyle3
- Miaomiao Zhou3
- Paul Zierep3
- Simon Bray3
- Stéphanie Robin3
- William Durand3
- Christoph Stritt2
- Clea Siguret2
- Esteban Perez-Wohlfeil2
- Jonathan Kreplak2
- Laura Leroi2
- Linelle Abueg2
- Mélanie Petera2
- Nate Coraor2
- Romane LIBOUBAN2
- Simon Gladman2
- Verena Moosmann2
- pimarin2
- Alex Ostrovsky1
- Alexandre Cormier1
- Donny Vrins1
- Ekaterina Polkh1
- Enis Afgan1
- Erwan Corre1
- Felicitas Kindel1
- Galo A. Goig1
- Jasper Ouwerkerk1
- Jennifer Hillman-Jackson1
- Lucille Delisle1
- Marius van den Beek1
- Matúš Kalaš1
- Saim Momin1
- Solenne Correard1
- Vijay1
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Resource type
- e-learning37
- slides5
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Related resource
- Associated Training Datasets
- Associated Workflows41
- Beacon v2: a discovery tool for genomic and pheno-clinical data1
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- GPAP: the RD-Connect Genome-Phenome Analysis Platform for diagnosis and gene discovery in rare disease research1
- Genomics England PanelApp1
- Introduction to the EGA and sharing sensitive data1
- REPET image Docker1
- Slides | Beacon v2: a discovery tool for genomic and pheno-clinical data1
- Slides | DisGeNET: a discovery platform designed to address a variety of questions concerning the genetic underpinning of human diseases1
- Slides | GPAP: the RD-Connect Genome-Phenome Analysis Platform for diagnosis and gene discovery in rare disease research1
- Slides | Introduction to the EGA and sharing sensitive data1
- VEIS webinar: The essentials of DUO codes | Presentation1
- VEIS webinar: The essentials of DUO codes | Video1
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