- Home
- Materials
Filter
Sort
-
-
Filter Clear filters
-
-
Scientific topic
- Exomes
- Genome annotation41
- Genomes41
- Genomics41
- Personal genomics41
- Synthetic genomics41
- Viral genomics41
- Whole genomes41
- Comparative transcriptomics35
- Transcriptome35
- Transcriptomics35
- Bayesian methods32
- Biostatistics32
- Descriptive statistics32
- Gaussian processes32
- Inferential statistics32
- Markov processes32
- Multivariate statistics32
- Probabilistic graphical model32
- Probability32
- Statistics32
- Statistics and probability32
- Biodiversity31
- Biological sequences31
- Sequence analysis31
- Sequence databases31
- Assembly29
- Community analysis29
- Environmental microbiology29
- Microbial ecology29
- Microbiome29
- Molecular community analysis29
- Sequence assembly29
- Metagenomics27
- Shotgun metagenomics27
- Bottom-up proteomics26
- Discovery proteomics26
- MS-based targeted proteomics26
- MS-based untargeted proteomics26
- Metaproteomics26
- Peptide identification26
- Protein and peptide identification26
- Proteomics26
- Quantitative proteomics26
- Targeted proteomics26
- Top-down proteomics26
- Computational ecology20
- Ecoinformatics20
- Ecological informatics20
- Ecology20
- Ecosystem science20
- Antimicrobial stewardship18
- Diffraction experiment18
- Imaging18
- Medical microbiology18
- Microbial genetics18
- Microbial physiology18
- Microbial surveillance18
- Microbiological surveillance18
- Microbiology18
- Microscopy18
- Microscopy imaging18
- Molecular infection biology18
- Molecular microbiology18
- Optical super resolution microscopy18
- Photonic force microscopy18
- Photonic microscopy18
- Taxonomy15
- DNA variation13
- Genetic variation13
- Genomic variation13
- Mutation13
- Polymorphism13
- Somatic mutations13
- Epigenomics11
- Computational chemistry8
- De novo genome sequencing6
- Epidemiology6
- Exometabolomics6
- Genome sequencing6
- LC-MS-based metabolomics6
- MS-based metabolomics6
- MS-based targeted metabolomics6
- MS-based untargeted metabolomics6
- Mass spectrometry-based metabolomics6
- Metabolites6
- Metabolome6
- Metabolomics6
- Metabonomics6
- NMR-based metabolomics6
- Public health6
- Public health and epidemiology6
- WGS6
- Whole genome resequencing6
- Whole genome sequencing6
- Communicable disease5
- DNA metabarcoding5
- Environmental metabarcoding5
- Gene and protein families5
- Gene families5
- Show N_FILTERS more
-
-
-
Tool
- Galaxy41
- JBrowse12
- BUSCO8
- FastQC6
- QUAST5
- Bandage4
- Minimap24
- gffread4
- BEDTools3
- Bwa-mem23
- Cutadapt3
- Diamond3
- Flye3
- GenomeScope 2.03
- MultiQC3
- OMArk3
- STAR3
- gfastats3
- snippy3
- Apollo2
- BCFtools2
- BLAST2
- Bakta2
- Bowtie2
- Bracken2
- COMBAT-TB Workbench2
- Clustal 1.8 (Clustal W, Clustal X)2
- DeepTools2
- Falco2
- GECKO2
- Helixer2
- InterProScan (EBI)2
- MAGeCK2
- Merqury2
- NanoPlot2
- Recentrifuge2
- SAMtools2
- TRANSIT2
- eggNOG-mapper v22
- fastp2
- tbl2gff32
- AUGUSTUS1
- BWA1
- BamTools1
- Circos1
- FEELnc1
- Filtlong1
- FreeBayes1
- GAEVAL1
- Galactic Circos1
- ISEScan1
- Integron Finder1
- Jvarkit1
- MAFFT1
- MAKER1
- Medaka1
- NCBI Resources1
- PlasmidFinder1
- Polypolish1
- QualiMap1
- RAxML1
- RED1
- Racon1
- RapidNJ1
- RepeatMasker1
- RepeatModeler1
- SALSA1
- SNAP1
- Smudgeplots1
- Trimmomatic1
- Unicycler1
- Vcflib1
- antiSMASH1
- bx-python1
- chemfp1
- compute_sequence_length1
- funannotate1
- ggplot21
- kraken21
- orfipy1
- purge_dups1
- shovill1
- staramr1
- tb-profiler1
- Show N_FILTERS more
-
-
-
Content provider
- GTN41
- Show N_FILTERS more
-
-
-
Keyword
- Genome Annotation23
- microgalaxy17
- biodiversity15
- prokaryote13
- jbrowse112
- Assembly10
- gmod9
- eukaryote8
- assembly5
- bacteria5
- illumina5
- one-health4
- Variant Analysis3
- essential genes3
- eukaryota3
- plants3
- Braker32
- Evolution2
- amr2
- maker2
- nanopore2
- pacbio2
- tnseq2
- CRISPR1
- Ecology1
- Helixer1
- Microbiome1
- QC1
- Sequence analysis1
- VGP1
- animals1
- annotation1
- apollo21
- cell line1
- cookbook1
- evolution1
- genome1
- genome editing1
- helixer1
- phylogenetics1
- polishing1
- tuberculosis1
- vgp1
- Show N_FILTERS more
-
-
-
Competency level
- Beginner29
- Intermediate11
- Advanced1
- Show N_FILTERS more
-
-
-
Target audience
- Students41
- Show N_FILTERS more
-
-
-
Author
- Anthony Bretaudeau10
- Bérénice Batut8
- Delphine Lariviere8
- Anna Syme5
- Anton Nekrutenko5
- Simon Gladman5
- Bazante Sanders3
- Helena Rasche3
- Romane LIBOUBAN3
- Stéphanie Robin3
- Torsten Seemann3
- Alex Ostrovsky2
- Alexandre Cormier2
- Christoph Stritt2
- Cristóbal Gallardo2
- Daniela Brites2
- Erwan Corre2
- Esteban Perez-Wohlfeil2
- Galo A. Goig2
- Laura Leroi2
- Maria Doyle2
- Mateo Boudet2
- Nathan Dunn2
- Brandon Pickett1
- Clea Siguret1
- Didier Debroas1
- Fabian Recktenwald1
- Giulio Formenti1
- Jonathan Kreplak1
- Kenji Fujihara1
- Linelle Abueg1
- Marcella Sozzoni1
- Nadia Goué1
- Paul Zierep1
- Peter van Heusden1
- Solenne Correard1
- Sylvia Mahara1
- Thoba Lose1
- Tom Brown1
- Twishi Gulati1
- Show N_FILTERS more
-
-
-
Contributor
- Saskia Hiltemann36
- Björn Grüning32
- Helena Rasche32
- Bérénice Batut31
- Anthony Bretaudeau21
- Cristóbal Gallardo11
- Deepti Varshney8
- Nicola Soranzo7
- Tristan Reynolds7
- Delphine Lariviere6
- Niall Beard6
- Teresa Müller6
- Anton Nekrutenko5
- Wolfgang Maier5
- Anna Syme4
- Peter van Heusden4
- Stéphanie Robin4
- Bazante Sanders3
- Gildas Le Corguillé3
- Maria Doyle3
- Miaomiao Zhou3
- Paul Zierep3
- Simon Bray3
- Christoph Stritt2
- Clea Siguret2
- Esteban Perez-Wohlfeil2
- Jonathan Kreplak2
- Laura Leroi2
- Linelle Abueg2
- Mélanie Petera2
- Nate Coraor2
- Romane LIBOUBAN2
- Simon Gladman2
- Solenne Correard2
- Verena Moosmann2
- William Durand2
- pimarin2
- Alex Ostrovsky1
- Alexandre Cormier1
- Donny Vrins1
- Enis Afgan1
- Erwan Corre1
- Felicitas Kindel1
- Galo A. Goig1
- Jennifer Hillman-Jackson1
- Lucille Delisle1
- Marius van den Beek1
- Matúš Kalaš1
- Saim Momin1
- Tom Brown1
- Vijay1
- Show N_FILTERS more
-
-
-
Resource type
- e-learning36
- slides5
- Show N_FILTERS more
-
-
-
Related resource
- Associated Workflows
- Associated Training Datasets46
- Beacon v2: a discovery tool for genomic and pheno-clinical data1
- DisGeNET: a discovery platform designed to address a variety of questions concerning the genetic underpinning of human diseases1
- GPAP: the RD-Connect Genome-Phenome Analysis Platform for diagnosis and gene discovery in rare disease research1
- Genomics England PanelApp1
- Introduction to the EGA and sharing sensitive data1
- REPET image Docker1
- Slides | Beacon v2: a discovery tool for genomic and pheno-clinical data1
- Slides | DisGeNET: a discovery platform designed to address a variety of questions concerning the genetic underpinning of human diseases1
- Slides | GPAP: the RD-Connect Genome-Phenome Analysis Platform for diagnosis and gene discovery in rare disease research1
- Slides | Introduction to the EGA and sharing sensitive data1
- VEIS webinar: The essentials of DUO codes | Presentation1
- VEIS webinar: The essentials of DUO codes | Video1
- Show N_FILTERS more
-
- Show materials from all spaces
- Show disabled materials
- Show materials with broken links
- Show archived materials