Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Providers
    • Nodes
    • Spaces

TeSS makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSS in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Transcriptome
    • Biological sequences8
    • Sequence analysis8
    • Sequence databases8
    • Assembly7
    • Sequence assembly7
    • Community analysis6
    • Environmental microbiology6
    • Metagenomics6
    • Microbial ecology6
    • Microbiome6
    • Molecular community analysis6
    • Shotgun metagenomics6
    • Comparative transcriptomics5
    • DNA variation5
    • Exomes5
    • Genetic variation5
    • Genome annotation5
    • Genomes5
    • Genomic variation5
    • Genomics5
    • Mutation5
    • Personal genomics5
    • Polymorphism5
    • Somatic mutations5
    • Synthetic genomics5
    • Taxonomy5
    • Transcriptomics5
    • Viral genomics5
    • Whole genomes5
    • Antimicrobial stewardship3
    • Epidemiology3
    • Medical microbiology3
    • Microbial genetics3
    • Microbial physiology3
    • Microbial surveillance3
    • Microbiological surveillance3
    • Microbiology3
    • Molecular infection biology3
    • Molecular microbiology3
    • Public health3
    • Public health and epidemiology3
    • Biodiversity2
    • Epigenomics2
    • Function analysis2
    • Functional analysis2
    • Metatranscriptomics2
    • Protein function analysis2
    • Protein function prediction2
    • AMR1
    • Antibiotic resistance (ABR)1
    • Antifungal resistance1
    • Antimicrobial resistance1
    • Antiprotozoal resistance1
    • Antiviral resistance1
    • Communicable disease1
    • Computational ecology1
    • DNA polymorphism1
    • De novo genome sequencing1
    • Disease1
    • Ecoinformatics1
    • Ecological informatics1
    • Ecology1
    • Ecosystem science1
    • Extensive drug resistance (XDR)1
    • Genome sequencing1
    • Infectious disease1
    • Microsatellites1
    • Multidrug resistance1
    • Multiple drug resistance (MDR)1
    • Multiresistance1
    • Pandrug resistance (PDR)1
    • Pathology1
    • RFLP1
    • SNP1
    • Single nucleotide polymorphism1
    • Total drug resistance (TDR)1
    • Transmissible disease1
    • VNTR1
    • Variable number of tandem repeat polymorphism1
    • WGS1
    • Whole genome resequencing1
    • Whole genome sequencing1
    • snps1
    • Show N_FILTERS more
    • Tool
    • FastQC
    • Galaxy32
    • MultiQC5
    • GOseq4
    • HISAT24
    • RSeQC4
    • SAMtools4
    • STAR4
    • BEDTools3
    • Cutadapt3
    • DESeq23
    • SCANPY3
    • Salmon3
    • anndata3
    • ggplot23
    • Biopython2
    • DeepTools2
    • DropletUtils2
    • Falco2
    • FeatureCounts2
    • R2
    • Trimmomatic2
    • UMI-tools2
    • annotatemyids2
    • Alevin1
    • ChiRA1
    • EGSEA1
    • GOEnrichment1
    • Heinz1
    • IsoformSwitchAnalyzeR1
    • MEME1
    • MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC1
    • Peakachu1
    • PfamScan1
    • RCAS1
    • SRA Software Toolkit1
    • StringTie1
    • Subread1
    • Targetfinder.org1
    • Trim Galore1
    • Trinity1
    • blockbuster1
    • fastp1
    • fgsea1
    • gffcompare1
    • gffread1
    • limma1
    • miRDeep21
    • pathview1
    • pyGenomeTracks1
    • rnaQUAST1
    • Show N_FILTERS more
    • Content provider
    • GTN5
    • Show N_FILTERS more
    • Keyword
    • Transcriptomics4
    • QC1
    • Single Cell1
    • alternative splicing1
    • bulk1
    • collections1
    • cyoa1
    • isoform switching1
    • mouse1
    • rna-seq1
    • viz1
    • Show N_FILTERS more
    • Competency level
    • Beginner3
    • Advanced1
    • Intermediate1
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International5
    • Show N_FILTERS more
    • Target audience
    • Students5
    • Show N_FILTERS more
    • Author
    • Belinda Phipson1
    • Bérénice Batut1
    • Cristóbal Gallardo1
    • Daniel Maticzka1
    • Florian Heyl1
    • Harriet Dashnow1
    • Helena Rasche1
    • Iacopo Cristoferi1
    • Lucille Delisle1
    • Marek Ostaszewski1
    • Maria Doyle1
    • Matti Hoch1
    • Mehmet Tekman1
    • Myrthe van Baardwijk1
    • Saskia Hiltemann1
    • Show N_FILTERS more
    • Contributor
    • Björn Grüning5
    • Helena Rasche5
    • Saskia Hiltemann5
    • Bérénice Batut3
    • Lucille Delisle3
    • Nicola Soranzo3
    • Gildas Le Corguillé2
    • Mehmet Tekman2
    • Cristóbal Gallardo1
    • Florian Heyl1
    • José Manuel Domínguez1
    • Linelle Abueg1
    • Maria Doyle1
    • Matti Hoch1
    • Mira Kuntz1
    • Mohua Das1
    • Morgan Howells1
    • Niall Beard1
    • Pavankumar Videm1
    • Sanjay Kumar Srikakulam1
    • Wendi Bacon1
    • Wolfgang Maier1
    • Show N_FILTERS more
    • Resource type
    • e-learning
    • Course materials1
    • Training materials1
    • slides1
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets5
    • Associated Workflows5
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Show materials with broken links
  • Show archived materials

e-Learning

  • Subscribe via email

Email Subscription

Register training material

Scientific topics: Transcriptome

and Tools: FastQC

and Resource type: e-learning

5 e-learning materials found
  • e-learning

    Genome-wide alternative splicing analysis

    ••• Advanced
    Transcriptomics Transcriptomics alternative splicing isoform switching
  • e-learning

    Pathway analysis with the MINERVA Platform

    •• Intermediate
    Transcriptomics Transcriptomics bulk cyoa rna-seq viz
  • e-learning

    CLIP-Seq data analysis from pre-processing to motif detection

    • Beginner
    Transcriptomics Transcriptomics
  • e-learning

    1: RNA-Seq reads to counts

    • Beginner
    Transcriptomics QC Transcriptomics collections mouse
  • e-learning

    Understanding Barcodes

    • Beginner
    Transcriptomics Single Cell
Training eSupport System
[email protected]
Contribute
About TeSS
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.