Training materials
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Presentation, Video
E-PAN Workshop 2026 | Enhancing Pan-Genome Analysis in Plants
• BeginnerPlant biology Genomics FAIR data Pangenome Visualization Quality Control Data sharing plant science -
e-learning
Genome annotation with Braker3
•• IntermediateGenomics Sequence assembly Biodiversity Zoology Plant biology Braker3 Genome Annotation biodiversity eukaryota jbrowse1 -
e-learning
Genome annotation with Helixer
•• IntermediateGenomics Biodiversity Zoology Plant biology Genome Annotation biodiversity eukaryota helixer jbrowse1 -
Training Workshop for Stress Knowledge Map
Plant biology networks and pathways Systems Biology Plant research plant science
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Online material, online course
Workshop on Resources for Plant Sciences, 2023
•• IntermediatePlant biology service bundle eLearning EeLP plant science Data Visualization Gene Ontology Knowledge graph MIAPPE -
e-learning
Data-driven plant sciences: A curated collection of EMBL-EBI on-demand training
Plant biology Machine learning Data architecture, analysis and design Database management Genotype and phenotype Data standards Spatial transcriptomics
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Recorded webinar
Non-invasive phenotyping to quantify the dynamics of plant-environment interaction
Plant biology
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Recorded webinar
Exploring plant genes and genomes with Ensembl
Plant biology
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Recorded webinar
Wheat resources in Ensembl Plants
Plant biology
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Video, Slides
Plant Phenotyping Data managment Webinar (MIAPPE)
• BeginnerPlant biology Phenomics Data quality management Data curation and archival Standardisation and normalisation
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