Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Providers
    • Nodes
    • Spaces

TeSS makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSS in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Software integration
    • Data management5
    • Metadata management5
    • Research data management (RDM)5
    • Aerobiology3
    • Behavioural biology3
    • Bioinformatics3
    • Biological rhythms3
    • Biological science3
    • Biology3
    • Chronobiology3
    • Cryobiology3
    • Pipelines3
    • Reproductive biology3
    • Tool integration3
    • Tool interoperability3
    • Workflows3
    • Bottom-up proteomics2
    • Discovery proteomics2
    • MS-based targeted proteomics2
    • MS-based untargeted proteomics2
    • Metaproteomics2
    • MicroRNA sequencing2
    • Peptide identification2
    • Protein and peptide identification2
    • Proteomics2
    • Quantitative proteomics2
    • RNA sequencing2
    • RNA-Seq2
    • RNA-Seq analysis2
    • Small RNA sequencing2
    • Small RNA-Seq2
    • Small-Seq2
    • Targeted proteomics2
    • Top-down proteomics2
    • Transcriptome profiling2
    • WTSS2
    • Whole transcriptome shotgun sequencing2
    • miRNA-seq2
    • Applied ontology1
    • Biomathematics1
    • Cloud computing1
    • Computational biology1
    • Computational pharmacology1
    • Computational toxicology1
    • Computer science1
    • DNA variation1
    • Data archival1
    • Data archiving1
    • Data curation1
    • Data curation and archival1
    • Data preservation1
    • Database curation1
    • Drug discovery1
    • Dynamic systems1
    • Dynamical systems1
    • Dynymical systems theory1
    • Genetic variation1
    • Genomic variation1
    • Graph analytics1
    • HPC1
    • High performance computing1
    • High-performance computing1
    • Mathematical biology1
    • Mathematics1
    • Maths1
    • Monte Carlo methods1
    • Multivariate analysis1
    • Mutation1
    • Ontologies1
    • Ontology1
    • Ontology and terminology1
    • Ontology relations1
    • Pharmacoinformatics1
    • Pharmacology1
    • Polymorphism1
    • Research data archiving1
    • Simulation experiment1
    • Somatic mutations1
    • Terminology1
    • Theoretical biology1
    • Toxicoinformatics1
    • Toxicology1
    • Upper ontology1
    • Virology1
    • Show N_FILTERS more
    • Operation
    • Alignment1
    • Alignment construction1
    • Alignment generation1
    • Allele calling1
    • Exome variant detection1
    • Genome variant detection1
    • Germ line variant calling1
    • Mutation detection1
    • Read pre-processing1
    • Sequence read pre-processing1
    • Somatic variant calling1
    • Variant calling1
    • Variant mapping1
    • de novo mutation detection1
    • Show N_FILTERS more
    • Tool
    • V-pipe1
    • Show N_FILTERS more
    • Content provider
    • ELIXIR-SI eLearning Platform (EeLP)1
    • SIB Swiss Institute of Bioinformatics1
    • VIB Training & Conferences1
    • Show N_FILTERS more
    • Keyword
    • Variant-calling1
    • CWL1
    • DSL21
    • EeLP1
    • NGS bioinformatics1
    • Nextflow1
    • Workflows1
    • common workflow language1
    • commonwl1
    • coronavirus1
    • eLearning1
    • Show N_FILTERS more
    • Competency level
    • Beginner3
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution Non Commercial No Derivatives 4.0 International1
    • Creative Commons Attribution Share Alike 4.0 International1
    • GNU General Public License v3.0 only1
    • Show N_FILTERS more
    • Target audience
    • bioinformaticians
    • Anyone interested in simulation of metabolic models, and in PerMedCoE tools and activities2
    • Clinicians2
    • PhD students2
    • Analysts1
    • Biologists1
    • Biologists interested in learning about RNA-seq1
    • Biologists, Genomicists, Computer Scientists1
    • EIP members1
    • Graduate students1
    • PhD Students1
    • Post docs1
    • Postgraduate students1
    • Research Software Engineers1
    • Researchers1
    • Students1
    • esearchers and research software engineers who would like to begin automating their analyses in workflows. 1
    • life scientists1
    • programmers1
    • Show N_FILTERS more
    • Author
    • Ivan Topolsky1
    • Kobe Lavaerts1
    • Kris Davie1
    • Michael Crusoe1
    • Rob Finn1
    • Steff Taelman1
    • Tuur Muyldermans1
    • Show N_FILTERS more
    • Contributor
    • Michael Crusoe1
    • Rob Finn1
    • Show N_FILTERS more
    • Resource type
    • Computer Software1
    • Installation instructions1
    • Manual1
    • Presentation1
    • course materials1
    • workflow1
    • Show N_FILTERS more
    • Node
    • Belgium1
    • EMBL-EBI1
    • Slovenia1
    • Switzerland1
    • Show N_FILTERS more
    • Collection
    • ELIXIR SIS-Containers - collection of training materials1
    • Show N_FILTERS more
    • Status
    • Active1
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Show materials with broken links
  • Show archived materials

Training materials

  • Subscribe via email

Email Subscription

Register training material

Scientific topics: Software integration

and Target audience: bioinformaticians

3 materials found
  • Presentation, course materials

    Introduction to Nextflow workshop

    ELIXIR node event
    • Beginner
    Workflows Nextflow DSL2
  • Computer Software, workflow

    How to use V-pipe (SARS-CoV-2 data)

    ELIXIR node event
    • Beginner
    Virology Genetic variation Workflows Variant calling Alignment Read pre-processing coronavirus NGS bioinformatics Variant-calling
  • Installation instructions, Manual

    How to use Common Workflow Language

    ELIXIR node event
    • Beginner
    Workflows commonwl common workflow language CWL Workflows eLearning EeLP
Training eSupport System
[email protected]
Contribute
About TeSS
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.