Portugal
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course materials
Ready For BioData Management?
• beginnerData management Data managment plan -
Documentation, Exercise, Handout, Scripts
PSLS20 - Practical Statistics for the Life Sciences (2020)
•• intermediateStatistics General Linear Models -
Documentation, Exercise, Handout, Scripts
PGDH18 - Population Genetics and Demographic History: model-based approaches (2018)
•• intermediatePopulation Genomics Phylogenetics -
Documentation, Exercise, Handout, Scripts
ABSTAT18 - Advanced Biostatistics for Bioinformatics Tool Users using R (2018)
•• intermediateStatistics and probability -
Documentation, Exercise, Handout, Scripts
3DAROC18 - 3C-based data analysis and 3D reconstruction of chromatin folding (2018)
•• intermediateHi-C -
Documentation, Exercise, Handout, Scripts
PPB18 - Programming in Python for Biologists (2018)
•• intermediateData retrieval Data handling Bioinformatics Biology Biological databases -
Documentation, Exercise, Handout, Scripts
ELB18F - Entry level Bioinformatics (First course in 2018)
• beginnerBioinformatics Sequencing -
Documentation, Exercise, Handout, Scripts
ADER18F - Analysis of Differential Expression with RNAseq (First course in 2018)
•• intermediateRNA-Seq Genomics RNA -
Documentation, Exercise, Handout, Scripts
PDA18 - Proteomics Data Analysis (2018)
•• intermediateProteomics Biological databases Mass spectrometry data -
Documentation, Exercise, Handout, Scripts
CPANG18 - Computational PANGenomics (2018)
•• intermediateGenomics -
Documentation, Exercise, Handout, Scripts
ADER18S - Analysis of Differential Expression with RNAseq (Second course in 2018)
•• intermediateRNA-Seq Genomics RNA -
Documentation, Exercise, Handout, Scripts
ELBS18 - Entry level Bioinformatics (Second course in 2018)
• beginnerBioinformatics Sequencing -
Documentation, Exercise, Handout, Scripts
ELB19F - Entry level Bioinformatics (First course in 2019)
• beginnerBioinformatics Sequencing -
Documentation, Exercise, Handout, Scripts
PDA19 - Proteomics Data Analysis (2019)
•• intermediateProteomics Biological databases Mass spectrometry data -
Documentation, Exercise, Handout, Scripts
PGDH19 - Population Genetics Demographic History: model-based approaches (2019)
•• intermediatePopulation Genomics Phylogenetics -
Documentation, Exercise, Handout, Scripts
ADER19F - Analysis of Differential Expression with RNAseq (First course in 2019)
•• intermediateRNA-Seq Genomics RNA -
Documentation, Exercise, Handout, Scripts
CPANG19 - Computational PANGenomics (2019)
•• intermediateGenomics -
Documentation, Exercise, Handout, Scripts
IBIP19 - Integrative Biological Interpretation using Proteomics (2019)
•• intermediateProteomics -
Training materials
Plant Phenotyping Data managment (MIAPPE)
• beginnerPhenomics Plant biology Data management Annotation Data formatting Plant Phenotyping Data-format data sharing -
PSLS22 Practical Statistics for the Life Sciences
•• intermediate -
Training materials
BioData.pt | ELIXIR PT Training Data Stewards for Life Sciences - Intro Course
• beginnerFAIR data Open science Data management Data management plan data-science data-analysis Data Integration training open science data FAIRness … -
Course materials, Training materials
"Ready for BioData Management?" Training Data Stewards for Life Sciences
Data management Data Steward Data management research data management FAIR FAIR Research Training (Training) Open science Open data RDM
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Toolkit
ELIXIR’s Impact Toolkit, to support performance and impact evaluation in a distributed data research infrastructure for the life sciences
• beginnerImpact Research Infrastructure Monitoring Indicator Evaluation Sustainability -
presentation
Ready for BioData Management? Intensive slide deck
Data management RDM RDMkit data stewardship Data Stewardship Wizard FAIR
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Documentation, Coding, Bioinformatics, Scripts, examples, e-learning
How to use pydna, a python library to plan and simulate DNA assembly, cloning and genome engineering
• beginnerSynthetic biology Bioinformatics Molecular biology Genetic engineering Metabolic engineering Genetics Synthetic Biology Genetic Engineering Molecular biology Cloning … -
Tutorial
EMO-BON Metagenomics: From Backend Integration to Frontend Processing
•• intermediateSPARQL fuseki Python -
Presentation, Video
E-PAN Workshop 2026 | Enhancing Pan-Genome Analysis in Plants
• beginnerPlant biology Genomics FAIR data Pan-genome Visualization Quality Control Data sharing plant science -
Course materials
Applied Metagenomics - AM21 (November 1-5, 2021)
•• intermediateMetagenomics Metagenomic sequencing Metagenomics metagenomics Genomic data Genomic sequences genomics Taxonomic concepts Genome assembly Genome Assembly … -
Course materials
Applied Metagenomics - AM22 (October 11-14, 2022)
•• intermediateMetagenomics Metagenomic sequencing Metagenomics metagenomics Genomic data Genomic sequences genomics Taxonomic concepts Genome assembly Genome Assembly … -
presentation
Computational Tools and Resources Workshop
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BioData.pt
BioData.pt is a distributed Research Infrastructure dedicated to data management in the fields of life and health sciences. It has the mission is to support the organisation and valorisation of biological data generated by research, clinical, and industrial activities in Portugal, through...
6 training materials2 events (42 past events)BioData.pt https://biodata.pt https://tess.elixir-europe.org/content_providers/biodata-pt BioData.pt is a distributed Research Infrastructure dedicated to data management in the fields of life and health sciences. It has the mission is to support the organisation and valorisation of biological data generated by research, clinical, and industrial activities in Portugal, through informatics, bioinformatics, and data management resources. Additionally, it is responsible for managing the Portuguese node of ELIXIR. /system/content_providers/images/000/000/806/original/BioDataPT_V.svg?1726234155 -
ELIXIR Portugal
ELIXIR Portugal is organized as a consortium of Portuguese research institutions which are part of the national biological information network, BioData.pt. Like ELIXIR itself, the Portuguese node is a decentralized network of specialized centers, under a common hardware and software...
18 training materials0 events (40 past events)ELIXIR Portugal https://elixir-portugal.org https://tess.elixir-europe.org/content_providers/elixir-portugal ELIXIR Portugal is organized as a consortium of Portuguese research institutions which are part of the national biological information network, BioData.pt. Like ELIXIR itself, the Portuguese node is a decentralized network of specialized centers, under a common hardware and software infrastructure, and with shared training and industry/entrepreneurship programmes. /system/content_providers/images/000/000/068/original/PT-0e669516dc5fb9386733dfbeb1c29c259c1131fcf64a34f0a085cbe97f3a53d7.svg?1726234035
Activity log
