Showing 24 materials
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PDF
PacBio de novo genome assembly - Hands on exercise
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Recorded webinar
Make your computational workflows findable and citable
Workflows WorkflowHub FAIR -
PDF
Genome assembly with long reads
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Documentation, Coding, Bioinformatics, Scripts, examples, e-learning
How to use pydna, a python library to plan and simulate DNA assembly, cloning and genome engineering
• beginnerSynthetic biology Bioinformatics Molecular biology Genetic engineering Metabolic engineering Genetics Synthetic Biology Genetic Engineering Molecular biology Cloning … -
e-learning, Video, Webinar
Using OpenCloning, an Open-Source web application to plan and document cloning and genome engineering
• beginnerGenetic engineering Molecular biology Synthetic biology Metabolic engineering Genetics web application Genetic Engineering Molecular biology genome engineering Genetics -
lessons
Visualisation with RStudio
• beginnerData visualisation Data Visualization Data visualisation R RStudio ggplot2 -
lessons
RStudio Basic
• beginnerBioinformatics R R Studio -
lessons
Andmehaldus 101
• beginnerData management Data management Data Management Plan -
RDMkit: The Research Data Management Toolkit for Life Sciences
Data management RDMkit -
lessons
Andmehaldus 101
• beginnerData management Data management Data Management Plan DMP File naming File organisation File structure Versioning Metadata README … -
scripts, examples
Using OpenCloning to automate the planning and documentation of cloning and genome engineering via python scripting
•• intermediateSynthetic biology Metabolic engineering Molecular biology Genetic engineering Synthetic biology Genetic Engineering Molecular biology -
Toolkit
ELIXIR’s Impact Toolkit, to support performance and impact evaluation in a distributed data research infrastructure for the life sciences
• beginnerImpact Research Infrastructure Monitoring Indicator Evaluation Sustainability -
E-Learning
Analysis of Sensitive Data in Secure Processing Environments (SPE)
•• intermediateComputer science Data security Security Computational research GA4GH WES WESkit -
lessons
AKKI andmehalduse seminar
• beginnerData management Data management Data management plan -
Tool, How-to guide
Assessing the performance and impact of research infrastructures – An annotated bibliography
Impact Research Infrastructure Cost-benefit analysis Econometrics Public Value Bibliography -
tutorial
Registering Datasets in Wikidata
• beginnerFAIR data Wikidata -
E-Learning
Crypt4GH Integration with proTES: A Guide to Secure Genomic Analysis
•• intermediateData security Computer science GA4GH Security ELIXIR -
e-learning
The Turing Way
Data Science Reproducibility Version control Reproducible Environment Continuous integration
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Presentation
FAIRify your data: data documentation and metadata
Data management data documentation metadata
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tutorials, slides, scripts
Training material made FAIR by design
• beginnerFAIR data FAIR digital objects Training materials TeSS Teaching -
Training materials
ELIXIR EXCELERATE Train the Trainer
Train the trainer Pedagogy Course development Course design -
Video
ELIXIR-CONVERGE - The why of research data management
• beginnerData management FAIR data Data curation and archival Data security Data integration and warehousing Data Life Cycle Data Steward Data Data access management Data management plan … -
tutorial
TeSS, how can I help you?
• beginnerFAIR OPEN Bioinformatics Teaching TeSS -
Learning pathway
FAIR Data and the Future of Publishing
• beginnerBiodiversity Bioinformatics FAIR data Publications FAIR data Biodiversity
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