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Development of a GA4GH-compliant, language-agnostic workflow execution service
biohackaton 2018
-
x2Go
Cloud
-
Variants: alignment and pre-treatment; GATK
Genomics
-
Getting started with Bioschemas
• beginnerBioschemas Standards -
Training materials
FAIR principles applied to bioinformatics
•• intermediateFAIR Reproducible Science Open science Data analysis Data processing -
Chip-seq: Pattern Analysis tutorial
Chip-seq NGS Pattern recognition
-
Training materials
Plant Phenotyping Data managment (MIAPPE)
• beginnerPhenomics Plant biology Data management Annotation Data formatting Plant Phenotyping Data-format data sharing -
IFB Shiny training
•• intermediateR-programming Reproducible Science -
Webinar, Slides, Video
WheatIS DataDiscovery webinar
• beginnerData management wheat information system data discovery -
Variant Filtering
Genomics
-
Exploring microbiomes with the MicroScope Platform
Annotation Genomics Metabolomics Microbial evolution Transcriptomics
-
Chip Seq: Annotation and visualization Tutorial
Annotation Chip-seq Data Visualization NGS
-
Sequencing 6000 chloroplast genomes : the PhyloAlps project
metagenomics
-
Third generation sequencing : the revolution of long reads
Genomics
-
Prototyping the new PSICQUIC 2.0
biohackaton 2018
-
RGP finder: prediction of Genomic Islands
CDS Data visualization Genomics RGP
-
Chip-seq: Functional Annotation tutorial
Chip-seq Functional Annotation NGS
-
MG-RAST — experiences from processing a quarter million metagenomic data sets
metagenomics
-
bio.tools & EDAM drop-in hackathon & discussions
biohackaton 2018
-
200 billion sequences and counting: analysis, discovery and exploration of datasets with EBI Metagenomics
metagenomics
-
Multiple Comparative Metagenomics using Multiset k-mer Counting
metagenomics
-
From Samples to Data : Assuring Downstream Analysis with Upstream Planning
metagenomics
-
Exploiting collisions between DNA molecules to characterize the genomic structures of complex communities
metagenomics
-
NGS data exploration with the MicroScope Platform
Genomics NGS RNA-seq SNP Transcriptomics
-
Gut metagenomics in cardiometabolic diseases
metagenomics
-
New perspectives on nitrite-oxidizing bacteria - linking genomes to physiology
metagenomics
-
ETBII 2023
-
Welcome message
biohackaton
-
Holistic metagenomics in marine communities
metagenomics
-
Assessing microbial biogeography by using a metagenomic approach
metagenomics
-
Workshops and courses
HOW TO RUN A NF-CORE NEXTFLOW WORKFLOW ON GENOTOUL ? - 7 avril 2026
7 April 2026 @ 09:00 - 17:00
Castanet-Tolosan, France
Face-to-face
-
Workshops and courses
FAIR Bioinfo Grand-Ouest
19 - 20 May 2026
Face-to-face
-
Workshops and courses
Langage R : introduction
1 - 3 June 2026
Bordeaux, France
Face-to-face
-
Workshops and courses
Initiation à Galaxy / Galaxy Initiation
15 June 2026 @ 09:00 - 17:00
Roscoff
Face-to-face
-
Workshops and courses
Principes FAIR & Git Initiation
16 June 2026 @ 09:00 - 17:00
Roscoff
Face-to-face
-
Workshops and courses
Linux - Initiation / Linux for Beginners
17 June 2026 @ 09:00 - 17:00
Roscoff
Face-to-face
-
Workshops and courses
Linux Avancé / Advanced Linux
18 June 2026 @ 09:00 - 17:00
Roscoff
Face-to-face
-
Workshops and courses
Utilisation du cluster - SLURM / Cluster usage - SLURM
19 June 2026 @ 09:00 - 17:00
Roscoff
Face-to-face
-
Workshops and courses
Initiation à R / R Initiation
22 June 2026 @ 09:00 - 17:00
Roscoff
Face-to-face
-
Workshops and courses
Manipulating & Visualizing Data with R
23 June 2026 @ 09:00 - 17:00
Roscoff
Face-to-face
-
Workshops and courses
Analyses NGS avec R
24 - 25 September 2026
Bordeaux, France
Face-to-face
-
Workshops and courses
Analyses Single Cell RNA-seq (ScRNA-seq) avec R
1 - 2 October 2026
Bordeaux, France
Face-to-face
-
Workshops and courses
EB3I - Ecole de Bioinformatique niveau débutant 2026
15 - 20 November 2026
Face-to-face
-
Workshops and courses
Formation metabarcoding ABiMS SeBiMER
6 - 11 December 2026
Face-to-face
Activity log
