SIB Swiss Institute of Bioinformatics

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e-learning

Data Repositories for Bioinformatics

• Beginner
Data management Online Repository Data reuse Data mining FAIR Data
Introduction to Spatial Transcriptomics Data Analysis

• Beginner
Computer Software, workflow

How to use V-pipe (SARS-CoV-2 data)

• Beginner
Virology Genetic variation Workflows Variant calling Alignment Read pre-processing coronavirus NGS bioinformatics Variant-calling
Training materials

Using bioinformatics to hunt SARS-CoV-2, its variants & its origins – a practical guide

• Beginner
Bioinformatics for schools, basic bioinformatics, SARS-CoV-2 pandemic, genome analysis, protein sequence analysis, protein structure analysis, virus variants, spike protein, training material
Introduction to Containers and Snakemake for Reproducible Research

• Beginner
container data management high-performance computing reproducibility workflows marc robinson-rechavi group training
e-learning

BLAST and multiple sequence alignment (MSA) programs

• Beginner
Sequence analysis Blast Multiple sequence alignment
BLAST and multiple sequence alignment (MSA) programs

• Beginner
Blast E learning Multiple sequence alignment
e-learning

UNIX Fundamentals

• Beginner
Computer science Problem based learning Programming Unix
Tutorial, Slideshow, e-learning

High Performance Computing (HPC) in Life Sciences

• Beginner
Computer science Bioinformatics Biology High performance computing high-performance computing
e-learning

neXtProt : Exploring human proteins

• Beginner
Proteins Proteomics Human biology
e-learning

ISMARA: A tool to infer genome-wide regulatory interactions

• Beginner
Systems biology Gene regulation Transcription factors and regulatory sites Computational modelling Gene regulation
e-learning

Cellosaurus : A resource on cell lines

• Beginner
Biosciences Experimental design and studies basic research Reproducibility cell line
Vital-IT Infrastructure Usage
e-learning

Explore and Visualize Your Data with Python

•• Intermediate
Data visualisation Bioinformatics Python Data analysis Data visualisation
NGS - Genome Variant Analysis

• Beginner
medicine and health,next generation sequencing,training,agriculture,environmental science,medicine and health medicine and health,next generation sequencing,training,agriculture,environmental science,rémy bruggmann group,medicine and health
Introduction to 3D-Structure Visualization and Homology Modeling using the Swiss-Model Workspace
R Basics Quiz

• Beginner
Introduction to Metagenomics Data Analysis of Microbial Communities

• Beginner
ViralZone

Phylogenetics of animal viral pathogens

• Beginner
Animal pathogens E learning Phylogenetics
Video, E-learning

FAIR principles in practice for health data

• Beginner
Computer science Data management FAIR data Medical informatics Standardisation and normalisation Design Clinical data RDF Knowledge graph Semantic framework …
ISMARA: A tool to infer genome-wide regulatory interactions
Querying SIB resources with SPARQL
SARS-CoV-2 : Studying a new virus
Introduction to Bulk RNA-Seq: From Quality Control to Pathway Analysis

• Beginner
functional genomics,genes and genomes,next generation sequencing,transcriptomics,training functional genomics,genes and genomes,next generation sequencing,transcriptomics,training,torsten schwede & thierry sengstag group
Cybersecurity Quiz for SIB employees only (internal use)
Getting Started With BioMedIT
BioMedIT: Information Security Awareness Training
Video, Training materials, E-learning

Validate Graph Data with SHACL

•• Intermediate
Medical informatics FAIR data Data management Computer science Validation Data handling Clinical data SHACL Data validation RDF …
Video, Training materials with mock data, e-learning

Querying Data with SPARQL

• Beginner
Computer science Data management FAIR data Medical informatics Data mining Query and retrieval Database search Data handling Data retrieval Clinical data …
When immunology meets bioinformatics

• Beginner

Showing 30 events out of 34 (also found 654 past events)

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Data Repositories for Bioinformatics

Introduction to Spatial Transcriptomics Data Analysis

How to use V-pipe (SARS-CoV-2 data)

Using bioinformatics to hunt SARS-CoV-2, its variants & its origins – a practical guide

Introduction to Containers and Snakemake for Reproducible Research

BLAST and multiple sequence alignment (MSA) programs

BLAST and multiple sequence alignment (MSA) programs

UNIX Fundamentals

High Performance Computing (HPC) in Life Sciences

neXtProt : Exploring human proteins

ISMARA: A tool to infer genome-wide regulatory interactions

Cellosaurus : A resource on cell lines

Vital-IT Infrastructure Usage

Explore and Visualize Your Data with Python

NGS - Genome Variant Analysis

Introduction to 3D-Structure Visualization and Homology Modeling using the Swiss-Model Workspace

R Basics Quiz

Introduction to Metagenomics Data Analysis of Microbial Communities

Phylogenetics of animal viral pathogens

FAIR principles in practice for health data

ISMARA: A tool to infer genome-wide regulatory interactions

Querying SIB resources with SPARQL

SARS-CoV-2 : Studying a new virus

Introduction to Bulk RNA-Seq: From Quality Control to Pathway Analysis

Cybersecurity Quiz for SIB employees only (internal use)

Getting Started With BioMedIT

BioMedIT: Information Security Awareness Training

Validate Graph Data with SHACL

Querying Data with SPARQL

When immunology meets bioinformatics

Advanced Programming with R

Advanced Programming with R

Advanced Statistics: Statistical Modelling

Introduction to High-performance Computing (sciCORE Cluster)

SIB PhD Training Network Annual Retreat

First Steps with Python in Life Sciences

Biology-informed Integration and Visualisation of Multiomics Data

Biology-informed Multiomics Data Integration and Visualization

First Steps with Python in Life Sciences

Introduction to Machine Learning with Python

First Steps with R in Life Sciences

First Steps with R in Life Sciences

Introduction to Bulk RNA-Seq: From Quality Control to Pathway Analysis

Ligand-protein docking, and computer-aided drug design

Ligand-protein docking, and computer-aided drug design

Ligand-protein docking, and computer-aided drug design

Introduction to NGS ATAC-seq data analysis

Introduction to Small RNA-seq Data Analysis with R

Introduction to Sequencing Data Analysis

ELIXIR-GOBLET Train-the-Trainer

Computer-Aided Drug Design

Version Control with Git

Cancer Variant Analysis

Version Control with Git

Single-Cell Transcriptomics with R

Introduction to Machine Learning with R

Ensuring More Accurate, Generalisable, and Interpretable Machine Learning Models for Bioinformatics

Nextflow in Action: Build Smarter, Faster, Reproducible Pipelines

ELIXIR-GOBLET Train-the-Trainer

Building and Maintaining Scientific Resources