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Keyword
- microbiome8
- introduction5
- sequence-analysis5
- transcriptomics5
- variant-analysis4
- NGS bioinformatics3
- epigenetics3
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- NGS2
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Scientific topic
- Bioinformatics741
- Genome annotation321
- Exomes312
- Genomes312
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- Viral genomics312
- Whole genomes312
- Biological modelling217
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- Biomedical research185
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- Data management156
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- Bottom-up proteomics152
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- MS-based targeted proteomics152
- MS-based untargeted proteomics152
- Metaproteomics152
- Peptide identification152
- Protein and peptide identification152
- Proteomics152
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- Targeted proteomics152
- Top-down proteomics152
- Cloud computing62
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- Exometabolomics58
- LC-MS-based metabolomics58
- MS-based metabolomics58
- MS-based targeted metabolomics58
- MS-based untargeted metabolomics58
- Mass spectrometry-based metabolomics58
- Metabolites58
- Metabolome58
- Metabolomics58
- Metabonomics58
- NMR-based metabolomics58
- Immunology56
- Computational pharmacology54
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- Pharmacology54
- Comparative transcriptomics51
- Transcriptome51
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- Biomathematics50
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- Mathematical biology50
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- Pipelines46
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- Recommender system45
- Reinforcement learning45
- Supervised learning45
- Unsupervised learning45
- RNA-Seq analysis43
- Data visualisation39
- Metagenomics34
- MicroRNA sequencing34
- RNA sequencing34
- RNA-Seq34
- Shotgun metagenomics34
- Small RNA sequencing34
- Small RNA-Seq34
- Small-Seq34
- Transcriptome profiling34
- WTSS34
- Whole transcriptome shotgun sequencing34
- miRNA-seq34
- Data rendering32
- Antimicrobial stewardship30
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Operation
- Alternative splicing analysis1
- Alternative splicing detection1
- Alternative splicing prediction1
- Cartography1
- Data handling1
- Differential splicing analysis1
- File handling1
- File processing1
- Mapping1
- Processing1
- Report handling1
- Sequencing QC1
- Sequencing quality assessment1
- Sequencing quality control1
- Splice transcript prediction1
- Split read mapping1
- Split-read mapping1
- Utility operation1
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Venue
- University of Freiburg, Werthmannstrasse 43
- European Bioinformatics Institute, Hinxton2
- Erasmus Medical Center, Dr. Molewaterplein 401
- FHNW University of Applied Sciences and Arts Northwestern Switzerland, Hofackerstrasse 301
- La Pedrera, 92, Passeig de Gràcia1
- PC-COLLEGE Berlin, 78, Stresemannstraße1
- University Freiburg1
- iad Pc-Pool1
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Sponsor
- ELIXIR Europe7
- German Network for Bioinformatics Infrastructure Service, Training, Cooperations & Cloud Computing7
- Australian BioCommons5
- Melbourne Bioinformatics5
- The University of Melbourne5
- ABRomics4
- Institut Français de Bioinformatique4
- Avans Hogeschool3
- University of Freiburg3
- Erasmus Medical Center2
- The Pennsylvania State University2
- Gallantries: Bridging Training Communities in Life Science, Environment and Health1
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Target audience
- bioinformaticians5
- Biologists4
- Biologists, Genomicists, Computer Scientists4
- Molecular Biologists4
- Pathologists4
- PhD students4
- post-docs3
- Computational biologists1
- Computer science1
- PhD Students1
- Postdoctoral students1
- Researchers1
- The course is aimed at researchers interested in core bioinformatics techniques, sequence searching and alignment. No prior experience of bioinformatics is required, but familiarity with biological databases and web tools would help. An undergraduate level understanding of molecular biology would be of benefit to those attending the workshop.1
- This course is aimed at life scientists who are working in the field of metagenomics, in the early stages of their data analysis, and who may already have some prior experience in using bioinformatics in their research. Prerequisites Some practical sessions in the course require a basic understanding of the Unix command line and the R statistics package. If you are not already familiar with these then please ensure that you complete these free tutorials before you attend the course: Basic introduction to the Unix environment: www.ee.surrey.ac.uk/Teaching/Unix Basic R concept tutorials: www.r-tutor.com/r-introduction1
- postdoc1
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Language
- English13
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Instructor
- Engy Nasr4
- Paul Zierep4
- Wolfgang Maier4
- Amirhossein Naghsh Nilchi3
- Pavankumar Videm3
- Teresa Müller3
- Diana Chiang Jurado2
- Lorna Richardson2
- Sam Holt2
- Alex Mitchell1
- Alexandre Almeida1
- Amanda Warr1
- Anika Erxleben1
- Benjamin Moore1
- Björn Grüning1
- Bérénice Batut1
- Chris Quince1
- Conor Walker1
- Darren Wilkinson1
- David Armstrong1
- Fabio Madeira1
- Fotis E. Psomopoulos1
- Guillermo Rangel1
- Hema Bye-A-Jee1
- Josephine Burgin1
- Mina Hojat Ansari1
- Nandana Madhusoodanan1
- Rob Finn1
- Rossana Zaru1
- Santino Faack1
- Tom Hancocks1
- Umberto Perron1
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