Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • Spaces
  • Events
  • Materials
  • Workflows
  • Collections
  • e-Learning
  • Learning paths
  • Directory
    • Providers
    • Nodes

TeSSHub makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSSHub in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Diffraction experiment5
    • Imaging5
    • Microscopy5
    • Microscopy imaging5
    • Optical super resolution microscopy5
    • Photonic force microscopy5
    • Photonic microscopy5
    • Show N_FILTERS more
    • Tool
    • scikit-image
    • Galaxy9
    • Galaxy Image Analysis6
    • PyTorch2
    • SCANPY2
    • CellProfiler1
    • ImageJ21
    • anndata1
    • edgeR1
    • Show N_FILTERS more
    • Content provider
    • GTN5
    • Show N_FILTERS more
    • Keyword
    • Imaging5
    • Conversion2
    • Image segmentation2
    • Bioimaging1
    • Deep learning1
    • Fluorescence microscopy1
    • Histology1
    • Image annotation1
    • Image thresholding1
    • Isolated object tracking1
    • Microscopy1
    • Multi-channel image1
    • Object counting1
    • Object feature extraction1
    • Overlay1
    • ROI selection1
    • Temporal analysis1
    • Time-lapse data1
    • Show N_FILTERS more
    • Competency level
    • Intermediate3
    • Beginner2
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International5
    • Show N_FILTERS more
    • Target audience
    • Students5
    • Show N_FILTERS more
    • Author
    • Diana Chiang Jurado
    • Leonid Kostrykin6
    • Riccardo Massei3
    • Anne Fouilloux2
    • Thomas Wollmann2
    • Arif ul Maula Khan1
    • Beatriz Serrano-Solano1
    • Even Moa Myklebust1
    • Reyhaneh Tavakoli-Koopaei1
    • Saskia Hiltemann1
    • Yi Sun1
    • Show N_FILTERS more
    • Contributor
    • Beatriz Serrano-Solano5
    • Leonid Kostrykin5
    • Björn Grüning4
    • Diana Chiang Jurado4
    • Saskia Hiltemann4
    • Helena Rasche2
    • Anne Fouilloux1
    • Anup Kumar1
    • Maarten Paul1
    • Maria Arrate Munoz Barrutia1
    • Riccardo Massei1
    • Thomas Wollmann1
    • reytakop1
    • Show N_FILTERS more
    • Resource type
    • e-learning5
    • Show N_FILTERS more
    • Related resource
    • Associated Workflows4
    • Associated Training Datasets3
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Show materials with broken links
  • Show archived materials

Training materials

  • Subscribe via email
  • Harvest using OAI-PMH

Email Subscription

Harvest using OAI-PMH

Exchange content using OAI-PMH

Use an OAI-PMH compatible tool to harvest metadata using the OAI-PMH endpoint. In particular, this endpoint can be used for exchanging content between different TeSS instances. See the TeSS documentation for more details.

Tools: scikit-image

and Authors: Diana Chiang Jurado

5 materials found
  • ELIXIR TeSS

    e-learning

    Where to start with bioimage analysis in Galaxy

    • Beginner
    Imaging Bioimaging Histology Imaging Microscopy
  • ELIXIR TeSS

    e-learning

    Quantification of electrophoresis gel bands using QuPath and Galaxy imaging tools

    •• Intermediate
    Imaging Conversion Imaging Multi-channel image Object feature extraction ROI selection
  • ELIXIR TeSS

    e-learning

    Using BioImage.IO models for image analysis in Galaxy

    •• Intermediate
    Imaging Deep learning Image annotation Image segmentation Imaging
  • ELIXIR TeSS

    e-learning

    Tracking of mitochondria and capturing mitoflashes

    •• Intermediate
    Imaging Imaging Isolated object tracking Temporal analysis Time-lapse data
  • ELIXIR TeSS

    e-learning

    Introduction to Image Analysis using Galaxy

    • Beginner
    Imaging Conversion Fluorescence microscopy Image segmentation Image thresholding Imaging Object counting Overlay
Training eSupport System
[email protected]
Contribute
About TeSSHub
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSSHub has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.