Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • Spaces
  • Events
  • Materials
  • Workflows
  • Collections
  • e-Learning
  • Learning paths
  • Directory
    • Providers
    • Nodes

TeSSHub makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSSHub in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Community analysis4
    • Environmental microbiology4
    • Metagenomics4
    • Microbial ecology4
    • Microbiome4
    • Molecular community analysis4
    • Shotgun metagenomics4
    • Assembly2
    • Sequence assembly2
    • Biological sequences1
    • Sequence analysis1
    • Sequence databases1
    • Taxonomy1
    • Show N_FILTERS more
    • Tool
    • Galaxy
    • KrakenTools2
    • BamTools1
    • Bandage1
    • Bowtie 21
    • Bracken1
    • CONCOCT1
    • CheckM1
    • CoverM1
    • Cutadapt1
    • FastQC1
    • MEGAHIT1
    • MaxBin1
    • MetaBAT 21
    • MetaPhlAn1
    • NGSUtils1
    • QUAST1
    • dRep1
    • dastool1
    • kraken21
    • metaspades1
    • seqtk1
    • taxonomy_krona_chart1
    • Show N_FILTERS more
    • Content provider
    • GTN4
    • Show N_FILTERS more
    • Keyword
    • metagenomics
    • Microbiome6
    • microgalaxy5
    • Genome Annotation1
    • Heatmap1
    • Nanopore data analysis1
    • Pathogens detection1
    • Phylogenetic tree1
    • assembly1
    • binning1
    • cyoa1
    • diversity1
    • metatranscriptomics1
    • taxonomic profiling1
    • Show N_FILTERS more
    • Competency level
    • Beginner3
    • Intermediate1
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International4
    • Show N_FILTERS more
    • Target audience
    • Students4
    • Show N_FILTERS more
    • Author
    • Paul Zierep
    • Bérénice Batut6
    • Polina Polunina2
    • Sophia Hampe2
    • Vini Salazar2
    • Fotis E. Psomopoulos1
    • Mina Hojat Ansari1
    • Nikos Pechlivanis1
    • Siyu Chen1
    • Teresa Müller1
    • Xenia Morera Martínez1
    • Show N_FILTERS more
    • Contributor
    • Bérénice Batut4
    • Paul Zierep4
    • Saskia Hiltemann4
    • Helena Rasche3
    • Teresa Müller3
    • Björn Grüning2
    • Deepti Varshney2
    • Natalie Whitaker-Allen2
    • Armin Dadras1
    • Cristóbal Gallardo1
    • Nikos Pechlivanis1
    • Polina Polunina1
    • Sophia Hampe1
    • Tarnima Omara1
    • Tristan Reynolds1
    • Show N_FILTERS more
    • Resource type
    • e-learning4
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets4
    • Associated Workflows4
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Show materials with broken links
  • Show archived materials

Training materials

  • Subscribe via email
  • Harvest using OAI-PMH

Email Subscription

Harvest using OAI-PMH

Exchange content using OAI-PMH

Use an OAI-PMH compatible tool to harvest metadata using the OAI-PMH endpoint. In particular, this endpoint can be used for exchanging content between different TeSS instances. See the TeSS documentation for more details.

Tools: Galaxy

and Keywords: metagenomics

and Authors: Paul Zierep

4 materials found
  • ELIXIR TeSS

    e-learning

    Calculating α and β diversity from microbiome taxonomic data

    • Beginner
    Metagenomics Microbial ecology Microbiome diversity metagenomics
  • ELIXIR TeSS

    e-learning

    Taxonomic Profiling and Visualization of Metagenomic Data

    • Beginner
    Metagenomics Microbial ecology Taxonomy Sequence analysis Microbiome metagenomics microgalaxy taxonomic profiling
  • ELIXIR TeSS

    e-learning

    Binning of metagenomic sequencing data

    •• Intermediate
    Metagenomics Microbial ecology Sequence assembly Microbiome binning metagenomics microgalaxy
  • ELIXIR TeSS

    e-learning

    Assembly of metagenomic sequencing data

    • Beginner
    Metagenomics Sequence assembly Microbial ecology Microbiome assembly metagenomics microgalaxy
Training eSupport System
[email protected]
Contribute
About TeSSHub
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSSHub has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.