Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Providers
    • Nodes
    • Spaces

TeSS makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSS in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Sequence databases
    • Algorithms98
    • Computer programming98
    • Data structures98
    • Programming languages98
    • Software development98
    • Software engineering98
    • Comparative transcriptomics49
    • Exomes49
    • Genome annotation49
    • Genomes49
    • Genomics49
    • Personal genomics49
    • Synthetic genomics49
    • Transcriptome49
    • Transcriptomics49
    • Viral genomics49
    • Whole genomes49
    • Bayesian methods44
    • Biostatistics44
    • Descriptive statistics44
    • Gaussian processes44
    • Inferential statistics44
    • Markov processes44
    • Multivariate statistics44
    • Probabilistic graphical model44
    • Probability44
    • Statistics44
    • Statistics and probability44
    • Biodiversity41
    • Metagenomics38
    • Shotgun metagenomics38
    • Bottom-up proteomics37
    • Discovery proteomics37
    • MS-based targeted proteomics37
    • MS-based untargeted proteomics37
    • Metaproteomics37
    • Peptide identification37
    • Protein and peptide identification37
    • Proteomics37
    • Quantitative proteomics37
    • Targeted proteomics37
    • Top-down proteomics37
    • Biological sequences35
    • Sequence analysis35
    • Assembly34
    • Sequence assembly34
    • Community analysis33
    • Environmental microbiology33
    • Microbial ecology33
    • Microbiome33
    • Molecular community analysis33
    • Computational ecology30
    • Ecoinformatics30
    • Ecological informatics30
    • Ecology30
    • Ecosystem science30
    • Diffraction experiment24
    • Imaging24
    • Microscopy24
    • Microscopy imaging24
    • Optical super resolution microscopy24
    • Photonic force microscopy24
    • Photonic microscopy24
    • Antimicrobial stewardship22
    • Medical microbiology22
    • Microbial genetics22
    • Microbial physiology22
    • Microbial surveillance22
    • Microbiological surveillance22
    • Microbiology22
    • Molecular infection biology22
    • Molecular microbiology22
    • DNA variation19
    • Genetic variation19
    • Genomic variation19
    • Mutation19
    • Polymorphism19
    • Somatic mutations19
    • Taxonomy17
    • Epigenomics14
    • Exometabolomics12
    • LC-MS-based metabolomics12
    • MS-based metabolomics12
    • MS-based targeted metabolomics12
    • MS-based untargeted metabolomics12
    • Mass spectrometry-based metabolomics12
    • Metabolites12
    • Metabolome12
    • Metabolomics12
    • Metabonomics12
    • NMR-based metabolomics12
    • Evolution10
    • Evolutionary biology10
    • Computational chemistry9
    • DNA metabarcoding7
    • Environmental metabarcoding7
    • Metabarcoding7
    • RNA metabarcoding7
    • eDNA metabarcoding7
    • Show N_FILTERS more
    • Tool
    • Galaxy33
    • FastQC9
    • taxonomy_krona_chart9
    • JBrowse6
    • BamTools4
    • Cutadapt4
    • MetaPhlAn4
    • MultiQC4
    • NanoPlot4
    • SAMtools4
    • fastp4
    • kraken24
    • mothur4
    • BLAST3
    • BWA3
    • KrakenTools3
    • MAFFT3
    • Newick Utilities3
    • BEDTools2
    • Bakta2
    • Bracken2
    • Diamond2
    • FASTQE2
    • FASTX-Toolkit2
    • GraPhlAn2
    • HUMAnN22
    • Minimap22
    • SortMeRNA2
    • Trimmomatic2
    • bx-python2
    • export2graphlan2
    • ggplot22
    • humann2
    • pycoQC2
    • seqtk2
    • staramr2
    • tbl2gff32
    • ABRicate1
    • Apollo1
    • BCFtools1
    • Bandage1
    • Bowtie1
    • Clair31
    • Clustal 2 (Clustal W, Clustal X)1
    • Combine Metaphlan and HUMAnN1
    • DeepTools1
    • Falco1
    • FastTree1
    • Flye1
    • FreeBayes1
    • ISEScan1
    • Infernal1
    • Integron Finder1
    • Krona1
    • MAPseq1
    • MLST1
    • Medaka1
    • NCBI fcs1
    • PRINSEQ1
    • PlasmidFinder1
    • QIIME1
    • Racon1
    • RapidNJ1
    • Recentrifuge1
    • SeqPrep1
    • TRANSIT1
    • Unicycler1
    • Vcflib1
    • ampvis1
    • biomformat1
    • cmsearch-deoverlap1
    • compute_sequence_length1
    • cshl_fastx_reverse_complement1
    • dada21
    • ete1
    • iqtree1
    • lotus21
    • miniasm1
    • orfipy1
    • phyloseq1
    • snippy1
    • trimAl1
    • varVAMP1
    • Show N_FILTERS more
    • Content provider
    • GTN
    • European Bioinformatics Institute (EBI)3
    • GOBLET2
    • SIB Swiss Institute of Bioinformatics2
    • VIB Training & Conferences1
    • Show N_FILTERS more
    • Keyword
    • microgalaxy22
    • Microbiome15
    • Sequence analysis12
    • Genome Annotation6
    • gmod6
    • jbrowse16
    • 16S5
    • metabarcoding5
    • prokaryote5
    • bacteria3
    • illumina3
    • metagenomics3
    • nanopore3
    • plants3
    • taxonomic profiling3
    • Variant Analysis2
    • amr2
    • biodiversity2
    • covid192
    • deutsch2
    • diversity2
    • español2
    • italiano2
    • metatranscriptomics2
    • Heatmap1
    • Nanopore data analysis1
    • Pathogens detection1
    • Phylogenetic tree1
    • amplicon1
    • annotation1
    • apollo21
    • assembly1
    • beer1
    • citizen science1
    • cookbook1
    • cyoa1
    • essential genes1
    • eukaryote1
    • evolution1
    • microbiome1
    • one-health1
    • plasmids1
    • taxonomic abundance1
    • taxonomy1
    • tnseq1
    • vgp1
    • virology1
    • Show N_FILTERS more
    • Competency level
    • Beginner33
    • Intermediate2
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International35
    • Show N_FILTERS more
    • Target audience
    • Students35
    • Show N_FILTERS more
    • Author
    • Bérénice Batut17
    • Saskia Hiltemann8
    • Anthony Bretaudeau3
    • Engy Nasr3
    • Paul Zierep3
    • Alexandre Cormier2
    • Anna Syme2
    • Anton Nekrutenko2
    • Cristóbal Gallardo2
    • Dave Clements2
    • Deepti Varshney2
    • Emma Leith2
    • Erwan Corre2
    • Helena Rasche2
    • Joachim Wolff2
    • Laura Leroi2
    • Pratik Jagtap2
    • Praveen Kumar2
    • QIIME22
    • Ray Sajulga2
    • Simon Gladman2
    • Stéphanie Robin2
    • Subina Mehta2
    • Torsten Seemann2
    • Wolfgang Maier2
    • Alex Ostrovsky1
    • Ava Hoffman1
    • Bazante Sanders1
    • Cameron Hyde1
    • Clea Siguret1
    • Coline Royaux1
    • Delphine Lariviere1
    • Didier Debroas1
    • Elischa Berger1
    • Eric Tvedte1
    • Maria Doyle1
    • Mateo Boudet1
    • Nadia Goué1
    • Natalie Kucher1
    • Nathan Dunn1
    • Polina Polunina1
    • Rand Zoabi1
    • Robert Meller1
    • Siyu Chen1
    • Sophia Hampe1
    • Teresa Müller1
    • Verena Moosmann1
    • Willem de Koning1
    • Show N_FILTERS more
    • Contributor
    • Saskia Hiltemann30
    • Bérénice Batut27
    • Helena Rasche26
    • Björn Grüning21
    • Anthony Bretaudeau11
    • Nicola Soranzo9
    • Cristóbal Gallardo8
    • Niall Beard8
    • Paul Zierep7
    • Teresa Müller7
    • William Durand7
    • Tristan Reynolds6
    • Deepti Varshney5
    • Wolfgang Maier5
    • Maria Doyle4
    • Anna Syme3
    • Engy Nasr3
    • Alexandre Cormier2
    • Anton Nekrutenko2
    • Anup Kumar2
    • Christine Oger2
    • Clea Siguret2
    • Gildas Le Corguillé2
    • Igor Makunin2
    • Mateo Boudet2
    • Matthias Bernt2
    • Michael Thang2
    • Natalie Kucher2
    • Nate Coraor2
    • Simon Bray2
    • Simon Gladman2
    • Swathi Nataraj2
    • Verena Moosmann2
    • Willem de Koning2
    • Alex Ostrovsky1
    • Anika Erxleben1
    • Anne Fouilloux1
    • Ava Hoffman1
    • Bazante Sanders1
    • Beatriz Serrano-Solano1
    • Bert Droesbeke1
    • Candace Savonen1
    • Delphine Lariviere1
    • Donny Vrins1
    • Ekaterina Polkh1
    • Elizabeth Humphries1
    • Eric Tvedte1
    • Frederick Tan1
    • Hans-Rudolf Hotz1
    • Jennifer Hillman-Jackson1
    • Katherine Cox1
    • Linelle Abueg1
    • Mehmet Tekman1
    • Miaomiao Zhou1
    • Mélanie Petera1
    • Nuwan Goonasekera1
    • Peter van Heusden1
    • Santino Faack1
    • Siyu Chen1
    • Stéphanie Robin1
    • Tarnima Omara1
    • Vijay1
    • mmiladi1
    • pimarin1
    • Show N_FILTERS more
    • Resource type
    • e-learning33
    • slides2
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets32
    • Associated Workflows31
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Show materials with broken links
  • Show archived materials

Training materials

  • Subscribe via email

Email Subscription

Register training material

Scientific topics: Sequence databases

and Content provider: GTN

35 materials found
  • e-learning

    Removal of human reads from SARS-CoV-2 sequencing data

    •• Intermediate
    Sequence analysis Sequence analysis covid19
  • e-learning

    Mapping

    • Beginner
    Sequence analysis Mapping Sequence analysis deutsch español italiano
  • e-learning

    Quality Control

    • Beginner
    Sequence analysis Sequence analysis deutsch español italiano
  • slides

    Mapping

    • Beginner
    Sequence analysis Sequence analysis
  • slides

    Quality Control

    • Beginner
    Sequence analysis Sequence analysis
  • 1
  • 2
  • 3
  • 4
Training eSupport System
[email protected]
Contribute
About TeSS
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.