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• • Scientific topic
  • Comparative transcriptomics16
  • Transcriptome16
  • Transcriptomics16
  • Assembly9
  • Biological sequences9
  • Bottom-up proteomics9
  • Discovery proteomics9
  • MS-based targeted proteomics9
  • MS-based untargeted proteomics9
  • Metaproteomics9
  • Peptide identification9
  • Protein and peptide identification9
  • Proteomics9
  • Quantitative proteomics9
  • Sequence analysis9
  • Sequence assembly9
  • Sequence databases9
  • Targeted proteomics9
  • Top-down proteomics9
  • Exomes8
  • Genome annotation8
  • Genomes8
  • Genomics8
  • Personal genomics8
  • Synthetic genomics8
  • Viral genomics8
  • Whole genomes8
  • DNA variation6
  • Epigenomics6
  • Genetic variation6
  • Genomic variation6
  • Mutation6
  • Polymorphism6
  • Somatic mutations6
  • Antimicrobial stewardship5
  • Medical microbiology5
  • Microbial genetics5
  • Microbial physiology5
  • Microbial surveillance5
  • Microbiological surveillance5
  • Microbiology5
  • Molecular infection biology5
  • Molecular microbiology5
  • Biodiversity4
  • Computational ecology3
  • Ecoinformatics3
  • Ecological informatics3
  • Ecology3
  • Ecosystem science3
  • Taxonomy3
  • Community analysis2
  • DNA metabarcoding2
  • DNA polymorphism2
  • Environmental metabarcoding2
  • Environmental microbiology2
  • Metabarcoding2
  • Metagenomics2
  • Microbial ecology2
  • Microbiome2
  • Microsatellites2
  • Molecular community analysis2
  • RFLP2
  • RNA metabarcoding2
  • SNP2
  • Shotgun metagenomics2
  • Single nucleotide polymorphism2
  • VNTR2
  • Variable number of tandem repeat polymorphism2
  • eDNA metabarcoding2
  • eRNA metabarcoding2
  • snps2
  • Bayesian methods1
  • Biostatistics1
  • ChIP-exo1
  • ChIP-seq1
  • ChIP-sequencing1
  • Chip Seq1
  • Chip sequencing1
  • Chip-sequencing1
  • Descriptive statistics1
  • Gaussian processes1
  • Gene and protein families1
  • Gene families1
  • Gene family1
  • Gene system1
  • Genes, gene family or system1
  • Genetic linkage1
  • Inferential statistics1
  • Linkage1
  • Linkage mapping1
  • Mapping1
  • Markov processes1
  • Multivariate statistics1
  • Probabilistic graphical model1
  • Probability1
  • Protein families1
  • Protein sequence classification1
  • Proteogenomics1
  • Statistics1
  • Statistics and probability1
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• • Tool
  • Galaxy64
  • FastQC13
  • SAMtools10
  • BEDTools7
  • BWA7
  • DeepTools6
  • FreeBayes5
  • JBrowse5
  • MultiQC5
  • HISAT24
  • BamTools3
  • Cutadapt3
  • Falco3
  • Stacks3
  • Trimmomatic3
  • ggplot23
  • Bandage2
  • Biopython2
  • FASTQE2
  • FASTX-Toolkit2
  • GEMINI2
  • GOseq2
  • NanoPlot2
  • QUAST2
  • RSeQC2
  • SPAdes2
  • STAR2
  • UMI-tools2
  • Unicycler2
  • Vcflib2
  • VelvetOptimiser2
  • lofreq2
  • mothur2
  • pycoQC2
  • taxonomy_krona_chart2
  • AUGUSTUS1
  • BCFtools1
  • BLAST1
  • Bowtie 21
  • Bwa-mem21
  • Cardinal1
  • ChIPpeakAnno1
  • Circos1
  • DESeq21
  • EGSEA1
  • FeatureCounts1
  • GOEnrichment1
  • Galactic Circos1
  • HUMAnN21
  • Heinz1
  • HiCExplorer1
  • IWTomics1
  • Krona1
  • MAKER1
  • MEME1
  • MetaPhlAn1
  • MethylDackel1
  • Newick Utilities1
  • Peakachu1
  • R1
  • RCAS1
  • SCANPY1
  • SNAP1
  • SRA Software Toolkit1
  • Salmon1
  • SeqCode1
  • StringTie1
  • Subread1
  • UniProt1
  • WoLF PSORT1
  • annotatemyids1
  • bed to protein map1
  • bx-python1
  • clusterProfiler1
  • compute_sequence_length1
  • customProDB1
  • ewastools1
  • fastp1
  • fgsea1
  • g:Profiler1
  • gffcompare1
  • msConvert1
  • mzToSQLite1
  • pathview1
  • pyGenomeTracks1
  • snippy1
  • snpEff1
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• • Content provider
  • GTN67
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• • Keyword
  • Transcriptomics12
  • Proteomics9
  • microgalaxy8
  • prokaryote8
  • Assembly7
  • Epigenetics6
  • Introduction to Galaxy Analyses6
  • Variant Analysis6
  • Single Cell5
  • español5
  • work-in-progress5
  • Genome Annotation4
  • Sequence analysis4
  • biodiversity4
  • deutsch4
  • gmod4
  • italiano4
  • jbrowse14
  • mouse4
  • DDA3
  • EBV dataset3
  • Ecology3
  • QC3
  • RAD-seq3
  • collections3
  • genetic composition EBV class3
  • proteogenomics3
  • ChIP-seq2
  • EBV workflow2
  • HeLa2
  • Microbiome2
  • Using Galaxy and Managing your Data2
  • single-cell2
  • 10x1
  • 16S1
  • EBV workflowz1
  • GO enrichment1
  • SILAC1
  • Statistics and machine learning1
  • bulk1
  • cyoa1
  • drosophila1
  • eukaryote1
  • galaxy-intro1
  • human1
  • imaging1
  • limma-voom1
  • maker1
  • mass spectrometry imaging1
  • metabarcoding1
  • metatranscriptomics1
  • network analysis1
  • rna-seq1
  • species population EBV class1
  • species populations EBV class1
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• • Competency level
  • Beginner59
  • Intermediate5
  • Advanced3
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• • Licence
  • Creative Commons Attribution 4.0 International67
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• • Target audience
  • Students67
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• • Author
  • Bérénice Batut12
  • Anton Nekrutenko9
  • Björn Grüning9
  • Simon Gladman9
  • Maria Doyle8
  • Nicola Soranzo7
  • Saskia Hiltemann7
  • Anika Erxleben6
  • Helena Rasche6
  • Delphine Lariviere5
  • Joachim Wolff5
  • Anna Syme4
  • Clemens Blank4
  • Florian Christoph Sigloch4
  • James Johnson4
  • Mallory Freeberg4
  • Pratik Jagtap4
  • Subina Mehta4
  • Timothy J. Griffin4
  • Anthony Bretaudeau3
  • Belinda Phipson3
  • Dave Clements3
  • Mehmet Tekman3
  • Mo Heydarian3
  • Praveen Kumar3
  • Ray Sajulga3
  • Torsten Seemann3
  • Vivek Bhardwaj3
  • Wolfgang Maier3
  • Yvan Le Bras3
  • Alexandre Cormier2
  • Andrea Bagnacani2
  • Anne Pajon2
  • Erwan Corre2
  • Fidel Ramirez2
  • Florian Heyl2
  • Harriet Dashnow2
  • Khaled Jum'ah2
  • Laura Leroi2
  • Lucille Delisle2
  • Pavankumar Videm2
  • Stéphanie Robin2
  • Ahmed Hamid Awan1
  • Alex Ostrovsky1
  • Anna Trigos1
  • Anne Fouilloux1
  • Cameron Hyde1
  • Chao Zhang1
  • Charity Law1
  • Christopher Barnett1
  • Cristóbal Gallardo1
  • Daniel Blankenberg1
  • Daniel Maticzka1
  • Devon Ryan1
  • Diana Chiang Jurado1
  • Dilmurat Yusuf1
  • Ekaterina Polkh1
  • Engy Nasr1
  • Fabio Cumbo1
  • Friederike Dündar1
  • Graham Etherington1
  • Hans-Rudolf Hotz1
  • Jovana Maksimovic1
  • Katarzyna Kamieniecka1
  • Krzysztof Poterlowicz1
  • Marius van den Beek1
  • Marzia A Cremona1
  • Matt Ritchie1
  • Matthias Fahrner1
  • Melanie Föll1
  • Menna Gamal1
  • Michele Maroni1
  • Nadia Goué1
  • Nick Stoler1
  • Olha Nahorna1
  • Peter van Heusden1
  • Sarah Peter1
  • Shian Su1
  • Torsten Houwaart1
  • Verena Moosmann1
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• • Contributor
  • Nicola Soranzo
  • Saskia Hiltemann287
  • Helena Rasche233
  • Björn Grüning225
  • Bérénice Batut129
  • Pavankumar Videm57
  • Cristóbal Gallardo56
  • Anthony Bretaudeau54
  • Niall Beard45
  • Martin Čech38
  • Teresa Müller35
  • Armin Dadras33
  • Mehmet Tekman33
  • Gildas Le Corguillé31
  • Wendi Bacon31
  • William Durand30
  • Melanie Föll26
  • Beatriz Serrano-Solano25
  • Anup Kumar24
  • Wolfgang Maier24
  • Subina Mehta22
  • Maria Doyle20
  • Simon Bray20
  • Yvan Le Bras19
  • Tristan Reynolds18
  • Anne Fouilloux15
  • Deepti Varshney15
  • Julia Jakiela14
  • Lucille Delisle14
  • Nate Coraor14
  • Paul Zierep14
  • Leonid Kostrykin13
  • Pratik Jagtap13
  • Timothy J. Griffin12
  • Anton Nekrutenko11
  • Delphine Lariviere11
  • Diana Chiang Jurado11
  • Marie Josse11
  • Mélanie Petera10
  • Anna Syme9
  • Marisa Loach9
  • Matthias Bernt9
  • Amirhossein Naghsh Nilchi8
  • Daniela Schneider8
  • Kaivan Kamali8
  • Mallory Freeberg8
  • Marius van den Beek8
  • Pablo Moreno8
  • Simon Gladman8
  • Stéphanie Robin8
  • David López7
  • Katherine Do7
  • Verena Moosmann7
  • Alexandre Cormier6
  • Florian Heyl6
  • Hans-Rudolf Hotz6
  • Morgan Howells6
  • Paulo Cilas Morais Lyra Junior6
  • Alireza Khanteymoori5
  • Bert Droesbeke5
  • Christopher Barnett5
  • Clemens Blank5
  • Fabio Cumbo5
  • Linelle Abueg5
  • Peter van Heusden5
  • Clea Siguret4
  • Ekaterina Polkh4
  • Florian Christoph Sigloch4
  • Bazante Sanders3
  • Coline Royaux3
  • Dave Clements3
  • Donny Vrins3
  • Engy Nasr3
  • Enis Afgan3
  • Joachim Wolff3
  • Katarzyna Kamieniecka3
  • Mateo Boudet3
  • Miaomiao Zhou3
  • Natalie Whitaker-Allen3
  • Timon Schlegel3
  • Xavier Garnier3
  • Alex Ostrovsky2
  • Andrea Bagnacani2
  • Anika Erxleben2
  • Camila Goclowski2
  • Carlos Chee Mendonça2
  • Christine Oger2
  • Christoph Stritt2
  • CicoZhang2
  • Daniel Blankenberg2
  • Esteban Perez-Wohlfeil2
  • Fidel Ramirez2
  • Graeme Tyson2
  • Helge Hecht2
  • Igor Makunin2
  • Jasper Ouwerkerk2
  • Jennifer Hillman-Jackson2
  • Jonathan Kreplak2
  • Jonathan Manning2
  • Junhao Qiu2
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• • Resource type
  • e-learning59
  • slides8
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• • Related resource
  • Associated Training Datasets
  • Associated Workflows68
  • Jupyter Notebook (with Solutions)2
  • Jupyter Notebook (without Solutions)2
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