Training materials
Related resources: Associated Training Datasets
and Contributors: Pavankumar Videm
42 materials found
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ELIXIR TeSS
e-learning
Inferring single cell trajectories with Monocle3 (R)
• BeginnerMIGHTS Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
ELIXIR TeSS
e-learning
Removing the effects of the cell cycle
• BeginnerDrop-seq Single Cell -
ELIXIR TeSS
e-learning
Comparing inferred cell compositions using MuSiC deconvolution
• BeginnerSingle Cell deconvolution transcriptomics -
ELIXIR TeSS
e-learning
Bulk matrix to ESet | Creating the bulk RNA-seq dataset for deconvolution
• BeginnerSingle Cell data management deconvolution transcriptomics -
ELIXIR TeSS
e-learning
Inferring single cell trajectories with Monocle3
• BeginnerTranscriptomics MIGHTS Single Cell paper-replication -
ELIXIR TeSS
e-learning
Combining single cell datasets after pre-processing
• BeginnerTranscriptomics MIGHTS Single Cell paper-replication -
ELIXIR TeSS
e-learning
Inferring single cell trajectories with Scanpy (Python)
• BeginnerTranscriptomics MIGHTS Single Cell jupyter-notebook paper-replication -
ELIXIR TeSS
e-learning
Formation of the Super-Structures on the Inactive X
• BeginnerEpigenomics ChIP-seq Epigenetics -
ELIXIR TeSS
e-learning
DNA Methylation data analysis
• BeginnerEpigenomics Epigenetics -
ELIXIR TeSS
e-learning
Whole transcriptome analysis of Arabidopsis thaliana
• BeginnerTranscriptomics Transcriptomics miRNA plants stress tolerance