Training materials
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e-learning
Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition
• BeginnerMetagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis … -
e-learning
ERGA post-assembly QC
• BeginnerSequence assembly Genomics Biodiversity Assembly QC animals assembly biodiversity genome plants -
e-learning
Exome sequencing data analysis for diagnosing a genetic disease
• BeginnerGenetic variation Variant Analysis -
e-learning
Identification of somatic and germline variants from tumor and normal sample pairs
• BeginnerGenetic variation Variant Analysis -
e-learning
Formation of the Super-Structures on the Inactive X
• BeginnerEpigenomics ChIP-seq Epigenetics -
e-learning
Identification of the binding sites of the Estrogen receptor
• BeginnerEpigenomics ChIP-seq Epigenetics work-in-progress -
e-learning
Identification of the binding sites of the T-cell acute lymphocytic leukemia protein 1 (TAL1)
• BeginnerEpigenomics ChIP-seq ChIP-seq Epigenetics -
e-learning
Pre-processing of Single-Cell RNA Data
• BeginnerTranscriptomics Single Cell work-in-progress -
e-learning
Differential abundance testing of small RNAs
• BeginnerTranscriptomics Transcriptomics -
e-learning
1: RNA-Seq reads to counts
• BeginnerTranscriptomics QC Transcriptomics collections mouse
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