- Home
- Materials
Filter
Sort
-
-
Filter Clear filters
-
-
Date added
- In the last 24 hours
- In the last 1 week
- In the last 1 month
-
-
-
Scientific topic
- Assembly8
- Biological sequences8
- Sequence analysis8
- Sequence assembly8
- Sequence databases8
- Community analysis5
- Environmental microbiology5
- Metagenomics5
- Microbial ecology5
- Microbiome5
- Molecular community analysis5
- Shotgun metagenomics5
- DNA variation4
- Exomes4
- Genetic variation4
- Genome annotation4
- Genomes4
- Genomic variation4
- Genomics4
- Mutation4
- Personal genomics4
- Polymorphism4
- Somatic mutations4
- Synthetic genomics4
- Taxonomy4
- Viral genomics4
- Whole genomes4
- Antimicrobial stewardship3
- Comparative transcriptomics3
- Epidemiology3
- Medical microbiology3
- Microbial genetics3
- Microbial physiology3
- Microbial surveillance3
- Microbiological surveillance3
- Microbiology3
- Molecular infection biology3
- Molecular microbiology3
- Public health3
- Public health and epidemiology3
- Transcriptome3
- Transcriptomics3
- Epigenomics2
- Function analysis2
- Functional analysis2
- Metatranscriptomics2
- Protein function analysis2
- Protein function prediction2
- AMR1
- Antibiotic resistance (ABR)1
- Antifungal resistance1
- Antimicrobial resistance1
- Antiprotozoal resistance1
- Antiviral resistance1
- Biodiversity1
- Communicable disease1
- DNA polymorphism1
- De novo genome sequencing1
- Disease1
- Extensive drug resistance (XDR)1
- Genome sequencing1
- Infectious disease1
- Microsatellites1
- Multidrug resistance1
- Multiple drug resistance (MDR)1
- Multiresistance1
- Pandrug resistance (PDR)1
- Pathology1
- RFLP1
- SNP1
- Single nucleotide polymorphism1
- Total drug resistance (TDR)1
- Transmissible disease1
- VNTR1
- Variable number of tandem repeat polymorphism1
- WGS1
- Whole genome resequencing1
- Whole genome sequencing1
- snps1
- Show N_FILTERS more
-
-
-
Tool
- FastQC
- Galaxy139
- SAMtools16
- JBrowse13
- MultiQC13
- BEDTools11
- BWA11
- QUAST10
- DeepTools9
- Falco9
- BUSCO8
- Bandage8
- NanoPlot8
- fastp8
- taxonomy_krona_chart8
- Cutadapt7
- GEMINI6
- BamTools5
- Flye5
- FreeBayes5
- Minimap25
- STAR5
- Trimmomatic5
- kraken25
- BCFtools4
- BLAST4
- Bwa-mem24
- KrakenTools4
- MetaPhlAn4
- Unicycler4
- ggplot24
- seqtk4
- Bakta3
- Cardinal3
- Diamond3
- GenomeScope 2.03
- HISAT23
- Merqury3
- Newick Utilities3
- Stacks3
- Trim Galore3
- UniProt3
- bx-python3
- gfastats3
- mothur3
- msConvert3
- scikit-learn3
- Apollo2
- Biopython2
- Bowtie2
- Bowtie 22
- Bracken2
- ChIPpeakAnno2
- DESeq22
- FASTQE2
- FASTX-Toolkit2
- GraPhlAn2
- HUMAnN22
- InterProScan (EBI)2
- JBrowse 22
- MACS2
- MaxQuant2
- Medaka2
- OMArk2
- RSeQC2
- Racon2
- RepeatMasker2
- SPAdes2
- SRA Software Toolkit2
- Salmon2
- SortMeRNA2
- TRANSIT2
- UCSC Genome Browser Utilities2
- UMI-tools2
- Unipept2
- Vcflib2
- VelvetOptimiser2
- clusterProfiler2
- dRep2
- eggNOG-mapper v22
- ewastools2
- export2graphlan2
- funannotate2
- gffread2
- humann2
- lofreq2
- metaQuantome2
- pycoQC2
- snippy2
- staramr2
- tbl2gff32
- ABRicate1
- AUGUSTUS1
- Bio3D1
- COMBAT-TB Workbench1
- CONCOCT1
- CheckM1
- Circos1
- Clair31
- Clustal 1.8 (Clustal W, Clustal X)1
- Show N_FILTERS more
-
-
-
Content provider
- GTN23
- Show N_FILTERS more
-
-
-
Keyword
- microgalaxy8
- Microbiome5
- Assembly4
- Variant Analysis4
- Sequence Analysis3
- assembly3
- nanopore3
- Epigenetics2
- Introduction to Galaxy Analyses2
- Transcriptomics2
- español2
- metagenomics2
- metatranscriptomics2
- prokaryote2
- ChIP-seq1
- Heatmap1
- Nanopore data analysis1
- Pathogens detection1
- Phylogenetic tree1
- QC1
- Single Cell1
- amr1
- beer1
- biodiversity1
- citizen science1
- collections1
- covid191
- cyoa1
- deutsch1
- gmod1
- italiano1
- jbrowse11
- mouse1
- one-health1
- plants1
- polishing1
- single-cell1
- tuberculosis1
- Show N_FILTERS more
-
-
-
Competency level
- Beginner22
- Intermediate1
- Show N_FILTERS more
-
-
-
Licence
- Creative Commons Attribution 4.0 International23
- Show N_FILTERS more
-
-
-
Target audience
- Students23
- Show N_FILTERS more
-
-
-
Author
- Bérénice Batut12
- Paul Zierep3
- Saskia Hiltemann3
- Simon Gladman3
- Alexandre Cormier2
- Anika Erxleben2
- Anna Syme2
- Anthony Bretaudeau2
- Anton Nekrutenko2
- Emma Leith2
- Engy Nasr2
- Erwan Corre2
- Laura Leroi2
- Leily Rabbani2
- Maria Doyle2
- Nicola Soranzo2
- Polina Polunina2
- Pratik Jagtap2
- Praveen Kumar2
- Ray Sajulga2
- Stéphanie Robin2
- Subina Mehta2
- Ahmed Hamid Awan1
- Alex Ostrovsky1
- Ava Hoffman1
- Bazante Sanders1
- Belinda Phipson1
- Björn Grüning1
- Cameron Hyde1
- Daniel Maticzka1
- Fidel Ramirez1
- Florian Heyl1
- Friederike Dündar1
- Harriet Dashnow1
- Helena Rasche1
- Mehmet Tekman1
- Natalie Kucher1
- Nick Stoler1
- Pavankumar Videm1
- Peter van Heusden1
- Robert Meller1
- Siyu Chen1
- Teresa Müller1
- Thoba Lose1
- Torsten Houwaart1
- Vini Salazar1
- Vivek Bhardwaj1
- Wolfgang Maier1
- Show N_FILTERS more
-
-
-
Contributor
- Bérénice Batut
- Helena Rasche34
- Saskia Hiltemann31
- Björn Grüning27
- Cristóbal Gallardo19
- Nicola Soranzo13
- Anthony Bretaudeau7
- Niall Beard7
- Wolfgang Maier7
- Gildas Le Corguillé6
- William Durand6
- Lucille Delisle5
- Maria Doyle5
- Mehmet Tekman5
- Paul Zierep5
- Tristan Reynolds5
- Pavankumar Videm4
- Teresa Müller4
- Wendi Bacon4
- Alexandre Cormier3
- Florian Heyl3
- Martin Čech3
- Mateo Boudet3
- Anna Syme2
- Anne Fouilloux2
- Anup Kumar2
- Armin Dadras2
- Beatriz Serrano-Solano2
- Christine Oger2
- David López2
- Deepti Varshney2
- Engy Nasr2
- Hans-Rudolf Hotz2
- Joachim Wolff2
- Leily Rabbani2
- Linelle Abueg2
- Morgan Howells2
- Mélanie Petera2
- Natalie Kucher2
- Simon Gladman2
- Swathi Nataraj2
- Yvan Le Bras2
- Ahmed Hamid Awan1
- Alex Ostrovsky1
- Anika Erxleben1
- Anton Nekrutenko1
- Antonia Taiani1
- Ava Hoffman1
- Bazante Sanders1
- Bert Droesbeke1
- Candace Savonen1
- Ekaterina Polkh1
- Elizabeth Humphries1
- Frederick Tan1
- José Manuel Domínguez1
- Katarzyna Kamieniecka1
- Katherine Cox1
- Khaled Jum'ah1
- Marie Josse1
- Marisa Loach1
- Marius van den Beek1
- Matthias Bernt1
- Matti Hoch1
- Matúš Kalaš1
- Miaomiao Zhou1
- Mira Kuntz1
- Mohua Das1
- Natalie Whitaker-Allen1
- Nate Coraor1
- Nuwan Goonasekera1
- Peter van Heusden1
- Phil Reed1
- Polina Polunina1
- Sanjay Kumar Srikakulam1
- Simon Bray1
- Siyu Chen1
- Subina Mehta1
- Timon Schlegel1
- Verena Moosmann1
- Vijay1
- Show N_FILTERS more
-
-
-
Resource type
- e-learning19
- slides4
- Show N_FILTERS more
-
-
-
Related resource
- Associated Training Datasets23
- Associated Workflows22
- Show N_FILTERS more
-
- Show materials from all spaces
- Show disabled materials
- Show materials with broken links
- Show archived materials