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- Comparative transcriptomics37
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Tool
- Galaxy263
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Content provider
- GTN332
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Keyword
- Single Cell38
- biodiversity34
- Proteomics32
- Statistics and Machine Learning27
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- Using Galaxy and Managing your Data22
- Transcriptomics20
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- jupyter-notebook19
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- Large Language Model5
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- Braker32
- Conversion2
- Deep learning2
- EML2
- Evolution2
- FAIR Data2
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Competency level
- Beginner249
- Intermediate74
- Advanced8
- Not specified2
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Licence
- Creative Commons Attribution 4.0 International333
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Target audience
- Students
- Galaxy Administrators71
- Instructors35
- PhD Students1
- Researchers1
- life scientists1
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Author
- Bérénice Batut42
- Helena Rasche25
- Anton Nekrutenko23
- Saskia Hiltemann23
- Björn Grüning19
- Anne Fouilloux18
- Anthony Bretaudeau17
- Subina Mehta16
- Yvan Le Bras16
- Mehmet Tekman14
- Nicola Soranzo14
- Cristóbal Gallardo12
- Anup Kumar11
- Delphine Lariviere11
- Julia Jakiela11
- Marie Josse11
- Melanie Föll11
- Pratik Jagtap11
- Wendi Bacon11
- Katarzyna Kamieniecka10
- Krzysztof Poterlowicz10
- Maria Doyle10
- Simon Bray10
- Simon Gladman10
- Wolfgang Maier10
- Pavankumar Videm9
- Anika Erxleben8
- Dave Clements8
- Khaled Jum'ah8
- Timothy J. Griffin8
- Florian Christoph Sigloch7
- Joachim Wolff7
- Laura Cooper7
- Matthias Fahrner7
- Praveen Kumar7
- Stéphanie Robin7
- Alex Ostrovsky6
- Anna Syme6
- Anne Pajon6
- Christopher Barnett6
- Daniel Blankenberg6
- Diana Chiang Jurado6
- Emma Leith6
- Erwan Corre6
- Morgan Howells6
- Nadia Goué6
- Alexandre Cormier5
- Andrew Mason5
- Beatriz Serrano-Solano5
- Branka Franicevic5
- Dechen Bhuming5
- James Johnson5
- Katherine Do5
- Kellie Snow5
- Korneel Hens5
- Laura Leroi5
- Leonid Kostrykin5
- Marius van den Beek5
- Munazah Andrabi5
- Nick Juty5
- Paul Zierep5
- Philippe Rocca-Serra5
- Raphael Mourad5
- Ray Sajulga5
- Robert Andrews5
- Sara Morsy5
- Saskia Lawson-Tovey5
- Xenia Perez Sitja5
- Alireza Khanteymoori4
- Amirhossein Naghsh Nilchi4
- Bazante Sanders4
- Clemens Blank4
- Daniela Schneider4
- Gildas Le Corguillé4
- Mallory Freeberg4
- Marisa Loach4
- Riccardo Massei4
- Vivek Bhardwaj4
- Belinda Phipson3
- Engy Nasr3
- Fidel Ramirez3
- Florian Heyl3
- Fotis E. Psomopoulos3
- Jean-François Martin3
- Lucille Delisle3
- Marie Crane3
- Mo Heydarian3
- Mélanie Petera3
- Polina Polunina3
- Romane LIBOUBAN3
- Tharindu Senapathi3
- Torsten Seemann3
- Tristan Reynolds3
- Brandon Pickett2
- Camila Goclowski2
- Christoph Stritt2
- Clea Siguret2
- Coline Royaux2
- Daniela Brites2
- Ekaterina Polkh2
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Contributor
- Björn Grüning
- Saskia Hiltemann462
- Helena Rasche381
- Bérénice Batut191
- Nicola Soranzo89
- Anthony Bretaudeau79
- Cristóbal Gallardo79
- Pavankumar Videm66
- Wendi Bacon58
- Martin Čech56
- Niall Beard55
- Armin Dadras47
- Beatriz Serrano-Solano46
- Teresa Müller46
- William Durand43
- Mehmet Tekman42
- Yvan Le Bras41
- Gildas Le Corguillé40
- Melanie Föll35
- Anup Kumar34
- Subina Mehta33
- Wolfgang Maier32
- Marius van den Beek30
- Marie Josse29
- Simon Bray24
- Anne Fouilloux23
- Donny Vrins23
- Maria Doyle22
- Nate Coraor22
- Peter van Heusden22
- Tristan Reynolds21
- Leonid Kostrykin20
- Anton Nekrutenko18
- Bazante Sanders18
- Julia Jakiela18
- Khaled Jum'ah18
- Deepti Varshney17
- Lucille Delisle17
- Petros Kountouris16
- Pratik Jagtap16
- Paul Zierep15
- Daniela Schneider14
- Delphine Lariviere14
- Diana Chiang Jurado13
- David López12
- Marisa Loach12
- Mélanie Petera12
- Timothy J. Griffin12
- Dave Clements11
- Katarzyna Kamieniecka11
- Matthias Bernt11
- Pablo Moreno11
- Stéphanie Robin11
- Simon Gladman10
- Amirhossein Naghsh Nilchi9
- Anna Syme9
- Mallory Freeberg9
- Alexandre Cormier8
- Florian Heyl8
- Kaivan Kamali8
- Verena Moosmann8
- Christopher Barnett7
- Katherine Do7
- Melissa Burke7
- Morgan Howells7
- Paulo Cilas Morais Lyra Junior7
- Clemens Blank6
- Ekaterina Polkh6
- Florian Christoph Sigloch6
- Hans-Rudolf Hotz6
- Alireza Khanteymoori5
- Bert Droesbeke5
- Clea Siguret5
- Fabio Cumbo5
- Linelle Abueg5
- Riccardo Massei5
- Wandrille Duchemin5
- olisand5
- Andrea Bagnacani4
- Coline Royaux4
- Fotis E. Psomopoulos4
- Joachim Wolff4
- Laura Leroi4
- Nadia Goué4
- Natalie Whitaker-Allen4
- Romane LIBOUBAN4
- Solenne Correard4
- Sotiroula Chatzimatthaiou4
- Anika Erxleben3
- Arthur Barreau3
- Eli Chadwick3
- Engy Nasr3
- Enis Afgan3
- Erwan Corre3
- Jasper Ouwerkerk3
- Jennifer Hillman-Jackson3
- Kenza Bazi-Kabbaj3
- Krzysztof Poterlowicz3
- Maria Christina Maniou3
- Martijn Kersloot3
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Resource type
- e-learning290
- slides43
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Related resource
- Associated Workflows232
- Associated Training Datasets231
- Jupyter Notebook (with Solutions)18
- Jupyter Notebook (without Solutions)18
- Quarto/RMarkdown Notebook2
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Collection
- ELIXIR hCNV community - collection of courses and materials.1
- ELIXIR Biodiversity Community1
- ELIXIR Federated Human Data Community1
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