TeSS (Training eSupport System)

Training materials

Tools: FastQC

and Competency level: Beginner

and Contributors: Cristóbal Gallardo

17 materials found

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e-learning

Identification of the micro-organisms in a beer using Nanopore sequencing

• Beginner
Metagenomics Microbial ecology Taxonomy Sequence analysis Microbiome beer citizen science metagenomics microgalaxy nanopore
e-learning

Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition

• Beginner
Metagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis …
slides

Identification of non-canonical ORFs and their potential biological function

• Beginner
Transcriptomics Transcriptomics
slides

Introduction to metatranscriptomics

• Beginner
Metagenomics Microbial ecology Microbiome
e-learning

Pre-processing of 10X Single-Cell ATAC-seq Datasets

• Beginner
10x Single Cell epigenetics
e-learning

Large genome assembly and polishing

• Beginner
Sequence assembly Genomics Biodiversity Assembly assembly biodiversity nanopore plants polishing
e-learning

Formation of the Super-Structures on the Inactive X

• Beginner
Epigenomics ChIP-seq Epigenetics
e-learning

Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)

• Beginner
Sequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Antimicrobial resistance Assembly amr assembly microgalaxy …
e-learning

An Introduction to Genome Assembly

• Beginner
Sequence assembly Assembly
e-learning

Metabarcoding/eDNA through Obitools

• Beginner
Ecology Biodiversity EBV dataset EBV workflow Ecology biodiversity community composition EBV class eDNA genetic composition EBV class metabarcoding

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Training materials

Identification of the micro-organisms in a beer using Nanopore sequencing

Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition

Identification of non-canonical ORFs and their potential biological function

Introduction to metatranscriptomics

Pre-processing of 10X Single-Cell ATAC-seq Datasets

Large genome assembly and polishing

Formation of the Super-Structures on the Inactive X

Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)

An Introduction to Genome Assembly

Metabarcoding/eDNA through Obitools