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Tools: SAMtools

and Competency level: Beginner

and Contributors: Cristóbal Gallardo

7 materials found
  • e-learning

    Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition

    • Beginner
    Metagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis …
  • e-learning

    ERGA post-assembly QC

    • Beginner
    Sequence assembly Genomics Biodiversity Assembly QC animals assembly biodiversity genome plants
  • e-learning

    Formation of the Super-Structures on the Inactive X

    • Beginner
    Epigenomics ChIP-seq Epigenetics
  • slides

    Introduction to ATAC-Seq data analysis

    • Beginner
    Epigenomics Epigenetics
  • slides

    ChIP-seq data analysis

    • Beginner
    Epigenomics Epigenetics
  • slides

    Unicycler assembly of SARS-CoV-2 genome with preprocessing to remove human genome reads

    • Beginner
    Sequence assembly Assembly covid19
  • slides

    Mapping

    • Beginner
    Sequence analysis Sequence analysis
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